The 2.0 version of rSNPBase

Variant report

Variant rs189286306
Chromosome Location chr4:107052933-107052934
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:107031800-107053400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr4:107032000-107058200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr4:107033400-107053000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr4:107033600-107053400 Weak transcription Osteobl bone
5 chr4:107033800-107053400 Weak transcription HSMM muscle
6 chr4:107034200-107053400 Weak transcription Right Ventricle heart
7 chr4:107035200-107057200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr4:107035600-107083200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr4:107035800-107053000 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr4:107035800-107053000 Weak transcription Fetal Lung lung
11 chr4:107035800-107053200 Weak transcription Fetal Stomach stomach
12 chr4:107035800-107053200 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr4:107035800-107053400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr4:107035800-107053400 Weak transcription Lung lung
15 chr4:107035800-107053400 Weak transcription Pancreas Pancrea
16 chr4:107035800-107053600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr4:107035800-107053600 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr4:107036000-107053200 Weak transcription Brain Anterior Caudate brain
19 chr4:107037200-107053000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr4:107037400-107053400 Weak transcription Brain Cingulate Gyrus brain
21 chr4:107037400-107053400 Weak transcription Brain Inferior Temporal Lobe brain
22 chr4:107037600-107053400 Weak transcription Brain Hippocampus Middle brain
23 chr4:107037600-107056200 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr4:107037600-107060600 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr4:107037600-107061600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr4:107037600-107066400 Weak transcription Fetal Kidney kidney
27 chr4:107037800-107053000 Weak transcription Primary B cells from peripheral blood blood
28 chr4:107037800-107053000 Weak transcription Liver Liver
29 chr4:107037800-107053400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr4:107037800-107053400 Weak transcription Adipose Nuclei Adipose
31 chr4:107037800-107053400 Weak transcription HepG2 liver
32 chr4:107037800-107077400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr4:107038000-107053000 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr4:107038000-107053000 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr4:107038000-107053200 Weak transcription Primary B cells from cord blood blood
36 chr4:107038000-107053400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr4:107038000-107053400 Weak transcription Aorta Aorta
38 chr4:107038000-107053400 Weak transcription Left Ventricle heart
39 chr4:107038000-107053400 Weak transcription Stomach Smooth Muscle stomach
40 chr4:107038000-107055400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr4:107038000-107056800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr4:107038000-107112000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr4:107038200-107053400 Weak transcription Primary T cells fromperipheralblood blood
44 chr4:107038400-107053000 Weak transcription Fetal Intestine Small intestine
45 chr4:107038400-107053400 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr4:107038400-107053400 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr4:107038400-107053400 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr4:107038400-107053400 Weak transcription Ovary ovary
49 chr4:107041400-107053000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr4:107047000-107053200 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015