| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1016354 |
chr5:105752391-106392762 |
ZNF genes & repeats Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1030118 |
chr5:106006097-106847949 |
Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv830439 |
chr5:106192038-106383828 |
Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv882679 |
chr5:106263197-106399718 |
Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv1841017 |
chr5:106299280-106325865 |
Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer
|
TF binding regionCpG islandlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 6 |
nsv525317 |
chr5:106308008-106311248 |
Weak transcription Enhancers Flanking Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 7 |
esv1795812 |
chr5:106308008-106326299 |
Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Genic enhancers Strong transcription Bivalent Enhancer
|
TF binding regionCpG islandlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 8 |
esv1799346 |
chr5:106308008-106326299 |
Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription
|
TF binding regionCpG islandlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 9 |
esv1815884 |
chr5:106308008-106326299 |
Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Genic enhancers Strong transcription
|
TF binding regionCpG islandlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 10 |
esv1843510 |
chr5:106308008-106326299 |
Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Strong transcription
|
TF binding regionCpG islandlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 11 |
esv1850520 |
chr5:106308008-106326299 |
Active TSS Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription Bivalent Enhancer
|
TF binding regionCpG islandlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 12 |
esv1815273 |
chr5:106308008-106326475 |
Enhancers Transcr. at gene 5' and 3' Genic enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer
|
TF binding regionCpG islandlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
