Variant report

Variant	rs189329638
Chromosome Location	chr6:33818312-33818313
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:33816600..33819400-chr6:33825889..33827498,2	MCF-7	breast:
2	chr6:33802445..33804788-chr6:33817259..33819823,2	K562	blood:
3	chr6:33812945..33816387-chr6:33817009..33820536,6	K562	blood:
4	chr6:33815385..33820274-chr6:33821193..33824652,6	K562	blood:
5	chr6:33817908..33819651-chr6:33841699..33844264,2	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv885774	chr6:33778964-33840121	Weak transcription Enhancers Genic enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv885775	chr6:33788055-33828178	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1032074	chr6:33795671-33835988	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv1022403	chr6:33795671-33847345	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv916210	chr6:33804111-34144062	Weak transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
6	nsv885776	chr6:33817929-33846143	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:33805400-33833400	Weak transcription	Right Atrium	heart
2	chr6:33807200-33819400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr6:33808600-33818800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr6:33808600-33819400	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr6:33809600-33823200	Weak transcription	Spleen	Spleen
6	chr6:33810800-33819200	Weak transcription	A549	lung
7	chr6:33811800-33818600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr6:33811800-33819200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr6:33816600-33822200	Weak transcription	Pancreas	Pancrea
10	chr6:33817200-33818800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr6:33817400-33819400	Enhancers	Fetal Brain Male	brain
12	chr6:33817600-33819600	Enhancers	Right Ventricle	heart
13	chr6:33818000-33818400	Enhancers	HUES48 Cell Line	embryonic stem cell
14	chr6:33818000-33818400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr6:33818000-33819800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr6:33818000-33819800	Enhancers	iPS-20b Cell Line	embryonic stem cell
17	chr6:33818000-33820200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr6:33818000-33820400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr6:33818000-33820400	Enhancers	HUES6 Cell Line	embryonic stem cell
20	chr6:33818000-33820400	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr6:33818200-33818400	Enhancers	Fetal Lung	lung
22	chr6:33818200-33819600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
23	chr6:33818200-33820200	Enhancers	iPS-15b Cell Line	embryonic stem cell
24	chr6:33818200-33820400	Enhancers	ES-I3 Cell Line	embryonic stem cell

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