Variant report

Variant	rs189364187
Chromosome Location	chrX:74695430-74695431
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534539	chrX:74669627-75200415	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	esv3429041	chrX:74693577-74695775	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:74667400-74701400	Weak transcription	Aorta	Aorta
2	chrX:74688400-74697200	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chrX:74691000-74697400	Weak transcription	Primary hematopoietic stem cells	blood
4	chrX:74691600-74699800	Weak transcription	Left Ventricle	heart
5	chrX:74693400-74706600	Weak transcription	Ovary	ovary
6	chrX:74693600-74696000	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chrX:74694200-74696800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chrX:74695000-74696800	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
9	chrX:74695200-74695600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chrX:74695200-74695800	Strong transcription	Dnd41	blood
11	chrX:74695400-74696000	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links