Variant report

Variant	rs1893691
Chromosome Location	chr18:28265420-28265421
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr18:28082947..28085380-chr18:28263743..28265731,2	K562	blood:
2	chr18:28264536..28266927-chr18:28268316..28270815,2	K562	blood:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs1943556	0.97[EUR][1000 genomes]
rs1943561	0.95[CEU][hapmap];0.94[EUR][1000 genomes]
rs1943563	0.95[CEU][hapmap];0.95[EUR][1000 genomes]
rs1943564	0.94[EUR][1000 genomes]
rs1943565	0.94[EUR][1000 genomes]
rs1943568	0.95[CEU][hapmap]
rs1943569	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs1943570	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1943571	0.95[CEU][hapmap];0.94[EUR][1000 genomes]
rs1943572	0.95[CEU][hapmap];0.94[EUR][1000 genomes]
rs1943573	0.95[CEU][hapmap];0.92[EUR][1000 genomes]
rs1970694	0.95[CEU][hapmap];0.83[GIH][hapmap];0.93[TSI][hapmap];0.80[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2027734	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2226847	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2678793	0.95[CEU][hapmap];0.94[EUR][1000 genomes]
rs2678795	0.95[CEU][hapmap];0.91[GIH][hapmap];0.91[TSI][hapmap]
rs2678797	0.94[EUR][1000 genomes]
rs2678798	0.96[EUR][1000 genomes]
rs2678799	0.95[CEU][hapmap];0.96[EUR][1000 genomes]
rs2678800	0.95[CEU][hapmap];0.96[EUR][1000 genomes]
rs2678802	0.95[CEU][hapmap];0.80[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2733128	0.95[CEU][hapmap];0.91[GIH][hapmap];0.89[TSI][hapmap]
rs2733129	0.95[CEU][hapmap];0.91[GIH][hapmap];0.91[TSI][hapmap];0.94[EUR][1000 genomes]
rs2850282	0.96[EUR][1000 genomes]
rs2850283	0.94[EUR][1000 genomes]
rs2850285	0.95[CEU][hapmap];0.94[EUR][1000 genomes]
rs7234719	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8098019	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:28264800-28265600	Enhancers	H9 Cell Line	embryonic stem cell
2	chr18:28264800-28265600	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr18:28265000-28265600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr18:28265400-28266400	Weak transcription	K562	blood

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