Variant report

Variant	rs189421980
Chromosome Location	chr2:212476535-212476536
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv584321	chr2:212446818-212511895	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv2754366	chr2:212470494-212541494	Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases
3	nsv961928	chr2:212475645-212476827	Enhancers Flanking Active TSS Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212467200-212480000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr2:212467400-212546800	Weak transcription	Aorta	Aorta
3	chr2:212470400-212489600	Weak transcription	Fetal Heart	heart
4	chr2:212475600-212477400	Flanking Active TSS	Dnd41	blood
5	chr2:212476000-212476600	Active TSS	Primary T helper naive cells fromperipheralblood	blood
6	chr2:212476000-212476800	Active TSS	Primary T cells fromperipheralblood	blood
7	chr2:212476200-212476600	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
8	chr2:212476200-212476600	Active TSS	Primary T helper cells PMA-I stimulated	--
9	chr2:212476200-212476600	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
10	chr2:212476200-212476600	Flanking Active TSS	HepG2	liver
11	chr2:212476200-212476800	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
12	chr2:212476200-212476800	Active TSS	Primary T helper cells fromperipheralblood	blood
13	chr2:212476200-212476800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
14	chr2:212476200-212476800	Active TSS	Primary T killer memory cells from peripheral blood	blood
15	chr2:212476400-212476800	Flanking Active TSS	Primary T cells from cord blood	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links