Variant report
| Variant | rs1896288 |
|---|---|
| Chromosome Location | chr22:33351262-33351263 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr22:33314000-33380800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 2 | chr22:33343200-33372600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 3 | chr22:33343600-33353000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 4 | chr22:33344200-33360400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 5 | chr22:33347600-33352600 | Weak transcription | Fetal Intestine Small | intestine |
| 6 | chr22:33347600-33352800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 7 | chr22:33347600-33353000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 8 | chr22:33347600-33360600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 9 | chr22:33347800-33357400 | Weak transcription | Brain Anterior Caudate | brain |
| 10 | chr22:33348000-33353000 | Weak transcription | Lung | lung |
| 11 | chr22:33348000-33382400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 12 | chr22:33348200-33351400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 13 | chr22:33348200-33351400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 14 | chr22:33348200-33352600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 15 | chr22:33348200-33352600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 16 | chr22:33348200-33352800 | Weak transcription | Colon Smooth Muscle | Colon |
| 17 | chr22:33348200-33352800 | Weak transcription | Right Ventricle | heart |
| 18 | chr22:33348200-33352800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 19 | chr22:33348200-33352800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 20 | chr22:33348200-33353000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 21 | chr22:33348200-33353000 | Weak transcription | Fetal Kidney | kidney |
| 22 | chr22:33348200-33353000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 23 | chr22:33348200-33353200 | Weak transcription | Spleen | Spleen |
| 24 | chr22:33348200-33353800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 25 | chr22:33348400-33352800 | Weak transcription | Fetal Muscle Leg | muscle |
| 26 | chr22:33348400-33353000 | Weak transcription | Fetal Lung | lung |
| 27 | chr22:33348400-33353200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 28 | chr22:33348600-33352600 | Weak transcription | Placenta | Placenta |
| 29 | chr22:33348600-33353000 | Weak transcription | Left Ventricle | heart |
| 30 | chr22:33348600-33353200 | Weak transcription | Right Atrium | heart |
| 31 | chr22:33348800-33353000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 32 | chr22:33349200-33353200 | Weak transcription | Fetal Heart | heart |
| 33 | chr22:33349600-33351400 | Enhancers | Fetal Brain Male | brain |
| 34 | chr22:33349800-33353000 | Weak transcription | Adipose Nuclei | Adipose |
| 35 | chr22:33350400-33353400 | Weak transcription | Primary hematopoietic stem cells | blood |
| 36 | chr22:33350800-33352800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 37 | chr22:33350800-33352800 | Weak transcription | Fetal Stomach | stomach |
| 38 | chr22:33351200-33351400 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 39 | chr22:33351200-33351400 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
