Variant report

Variant	rs189654048
Chromosome Location	chr12:42238007-42238008
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899043	chr12:42058138-42313665	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv899044	chr12:42058138-42321161	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1047870	chr12:42158954-42254373	Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers Bivalent Enhancer	lncRNA	n/a	inside rSNPs	diseases
4	nsv1041975	chr12:42159517-42254373	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats	lncRNA	n/a	inside rSNPs	diseases
5	nsv1037646	chr12:42160758-42254373	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	lncRNA	n/a	inside rSNPs	diseases
6	nsv1055012	chr12:42221483-42253502	Enhancers ZNF genes & repeats Weak transcription	lncRNA	n/a	inside rSNPs	diseases
7	nsv1051707	chr12:42221483-42254373	Weak transcription Enhancers ZNF genes & repeats	lncRNA	n/a	inside rSNPs	diseases
8	esv3421035	chr12:42237570-42239198	Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a
9	esv9572	chr12:42237847-42239131	Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a
10	nsv512270	chr12:42237914-42238946	Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a
11	esv3486408	chr12:42237945-42238961	Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a
12	esv3487647	chr12:42237968-42238961	Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a
13	esv3487646	chr12:42237987-42238914	Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a
14	esv3487649	chr12:42237997-42238991	Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a
15	esv3486385	chr12:42237998-42238949	ZNF genes & repeats Weak transcription	n/a	n/a	inside rSNPs	n/a
16	esv3487651	chr12:42238003-42238935	ZNF genes & repeats Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:42218600-42257000	Weak transcription	Aorta	Aorta
2	chr12:42238000-42238200	ZNF genes & repeats	Primary hematopoietic stem cells	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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