Variant report

Variant	rs189768639
Chromosome Location	chr10:6097328-6097329
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:6092360..6095172-chr10:6096702..6099440,2	K562	blood:

Extended variants
information (count: 17 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34147	chr10:5726821-6105717	Strong transcription Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
2	esv34061	chr10:5726821-6225187	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
3	nsv1042286	chr10:5795129-6578445	Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
4	nsv894814	chr10:6078032-6100725	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	esv3434679	chr10:6096746-6098894	Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv2516054	chr10:6097021-6098388	Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3323985	chr10:6097052-6097937	Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv9342	chr10:6097160-6098137	Weak transcription Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv2014648	chr10:6097179-6098071	Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3404164	chr10:6097258-6097973	Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3507332	chr10:6097283-6097957	Enhancers Weak transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3507331	chr10:6097298-6097925	Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv3507334	chr10:6097300-6097905	Weak transcription Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv3507333	chr10:6097303-6097975	Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
15	esv3462285	chr10:6097308-6097938	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
16	esv3462396	chr10:6097323-6097896	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
17	esv3507337	chr10:6097323-6097929	Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:6093400-6101000	Weak transcription	Psoas Muscle	Psoas
2	chr10:6093400-6102800	Enhancers	Primary B cells from peripheral blood	blood
3	chr10:6093800-6104200	Transcr. at gene 5' and 3'	Primary T helper cells PMA-I stimulated	--
4	chr10:6094000-6097400	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
5	chr10:6095200-6098400	Weak transcription	Left Ventricle	heart
6	chr10:6095400-6097400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
7	chr10:6096000-6097400	Enhancers	GM12878-XiMat	blood
8	chr10:6096200-6098600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr10:6096200-6098800	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr10:6096200-6102000	Weak transcription	Primary hematopoietic stem cells	blood
11	chr10:6096200-6107400	Weak transcription	Placenta	Placenta
12	chr10:6096400-6100200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
13	chr10:6096400-6100400	Weak transcription	Primary T cells from cord blood	blood
14	chr10:6096400-6102800	Weak transcription	Primary monocytes fromperipheralblood	blood
15	chr10:6096400-6103800	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr10:6096600-6098400	Weak transcription	Right Atrium	heart
17	chr10:6096600-6098600	Weak transcription	Primary B cells from cord blood	blood
18	chr10:6096600-6098600	Weak transcription	Primary T cells fromperipheralblood	blood
19	chr10:6096600-6100600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
20	chr10:6096600-6103600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
21	chr10:6096800-6098000	Weak transcription	Adipose Nuclei	Adipose
22	chr10:6096800-6098600	Weak transcription	Small Intestine	intestine
23	chr10:6096800-6099600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
24	chr10:6097000-6098200	Weak transcription	Primary T helper cells fromperipheralblood	blood
25	chr10:6097200-6097800	Genic enhancers	Primary T regulatory cells fromperipheralblood	blood
26	chr10:6097200-6098000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
27	chr10:6097200-6098000	Weak transcription	Spleen	Spleen
28	chr10:6097200-6098800	Weak transcription	Lung	lung
29	chr10:6097200-6100200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
30	chr10:6097200-6102200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood

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