Variant report

Variant	rs189831713
Chromosome Location	chr10:112684033-112684034
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:112674469..112676467-chr10:112682568..112686399,3	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051566	chr10:112580049-112730573	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
2	nsv1035602	chr10:112636053-112781413	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
3	nsv1051327	chr10:112650316-112772917	ZNF genes & repeats Strong transcription Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
4	nsv540774	chr10:112650316-112772917	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
5	nsv831985	chr10:112652089-112803103	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
6	nsv1047865	chr10:112660427-112730573	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
7	nsv1048809	chr10:112683822-112781413	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:89 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:112680200-112687800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr10:112680600-112692400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
3	chr10:112680600-112696600	Weak transcription	Lung	lung
4	chr10:112680600-112706800	Weak transcription	Esophagus	oesophagus
5	chr10:112680800-112684200	Enhancers	Primary T helper cells fromperipheralblood	blood
6	chr10:112680800-112687800	Weak transcription	Primary T cells fromperipheralblood	blood
7	chr10:112680800-112691800	Weak transcription	Ovary	ovary
8	chr10:112680800-112691800	Weak transcription	Psoas Muscle	Psoas
9	chr10:112680800-112704600	Weak transcription	Aorta	Aorta
10	chr10:112681000-112684200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr10:112681000-112684200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
12	chr10:112681000-112684200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr10:112681000-112684200	Enhancers	Colon Smooth Muscle	Colon
14	chr10:112681000-112687200	Weak transcription	Brain Angular Gyrus	brain
15	chr10:112681000-112687800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
16	chr10:112681000-112687800	Weak transcription	NH-A	brain
17	chr10:112681000-112690600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
18	chr10:112681000-112690800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr10:112681000-112692200	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr10:112681000-112692400	Weak transcription	Right Atrium	heart
21	chr10:112681000-112696400	Weak transcription	Fetal Stomach	stomach
22	chr10:112681000-112696600	Weak transcription	Thymus	Thymus
23	chr10:112681000-112704600	Weak transcription	Right Ventricle	heart
24	chr10:112681200-112692000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
25	chr10:112681400-112691600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr10:112681600-112685800	Enhancers	Primary B cells from cord blood	blood
27	chr10:112682000-112685400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
28	chr10:112682000-112686600	Weak transcription	HSMMtube	muscle
29	chr10:112682000-112688400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
30	chr10:112682000-112691600	Weak transcription	NHEK	skin
31	chr10:112682000-112700600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr10:112682000-112702000	Weak transcription	Cortex derived primary cultured neurospheres	brain
33	chr10:112682000-112702200	Weak transcription	Brain Germinal Matrix	brain
34	chr10:112682000-112704600	Weak transcription	Brain Hippocampus Middle	brain
35	chr10:112682000-112708400	Weak transcription	Primary monocytes fromperipheralblood	blood
36	chr10:112682000-112732400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
37	chr10:112682200-112684400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr10:112682200-112685000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
39	chr10:112682200-112688400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
40	chr10:112682200-112688400	Weak transcription	Skeletal Muscle Male	skeletal muscle
41	chr10:112682400-112684200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr10:112682600-112684200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
43	chr10:112682600-112684600	Enhancers	Rectal Mucosa Donor 31	rectum
44	chr10:112682600-112689000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr10:112682800-112684200	Enhancers	Primary T cells from cord blood	blood
46	chr10:112682800-112684200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
47	chr10:112682800-112685800	Weak transcription	Brain Inferior Temporal Lobe	brain
48	chr10:112683000-112684200	Enhancers	Duodenum Smooth Muscle	Duodenum
49	chr10:112683000-112692000	Weak transcription	HSMM	muscle
50	chr10:112683000-112700800	Weak transcription	Dnd41	blood

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