Variant report

Variant	rs189834131
Chromosome Location	chr7:27153978-27153979
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:25)
CpG islands
(count:61)
Chromatin interactive
region (count:3)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:25 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CHD1	chr7:27152421-27165798	IMR90	lung:	n/a	n/a
2	POLR2A	chr7:27152538-27159551	IMR90	lung:	n/a	n/a
3	POLR2A	chr7:27153679-27154424	HUVEC	blood vessel:	n/a	n/a
4	TCF7L2	chr7:27153888-27154201	HEK293	kidney:	n/a	n/a
5	TCF12	chr7:27152419-27154456	A549	lung:	n/a	chr7:27153538-27153548
6	POLR2A	chr7:27153672-27154060	HUVEC	blood vessel:	n/a	n/a
7	POLR2A	chr7:27152904-27154071	HUVEC	blood vessel:	n/a	n/a
8	POLR2A	chr7:27152866-27154366	A549	lung:	n/a	n/a
9	TCF7L2	chr7:27153871-27154274	PANC-1	pancreas:	n/a	n/a
10	POLR2A	chr7:27153689-27154459	HUVEC	blood vessel:	n/a	n/a
11	JUND	chr7:27153683-27154232	A549	lung:	n/a	n/a
12	ZNF263	chr7:27153789-27154248	HEK293-T-REx	kidney:	n/a	n/a
13	POLR2A	chr7:27153738-27155470	MCF10A-Er-Src	breast:	n/a	n/a
14	POLR2A	chr7:27153735-27154059	H1-neurons	neurons:	n/a	n/a
15	POLR2A	chr7:27152987-27154036	HEK293	kidney:	n/a	n/a
16	RFX5	chr7:27153667-27154012	Hela-S3	cervix:	n/a	n/a
17	POLR2A	chr7:27153684-27154399	HUVEC	blood vessel:	n/a	n/a
18	MAZ	chr7:27152242-27154445	IMR90	lung:	n/a	chr7:27153296-27153306 chr7:27153064-27153074
19	POLR2A	chr7:27153674-27154450	PANC-1	pancreas:	n/a	n/a
20	MAX	chr7:27153683-27154044	ECC-1	luminal epithelium:	n/a	n/a
21	MAX	chr7:27152686-27154448	A549	lung:	n/a	chr7:27153296-27153306 chr7:27153064-27153074
22	POLR2A	chr7:27152424-27154448	PANC-1	pancreas:	n/a	n/a
23	SUZ12	chr7:27153753-27157360	NT2-D1	testis:	n/a	n/a
24	MYC	chr7:27153853-27154323	MCF10A-Er-Src	breast:	n/a	n/a
25	SP1	chr7:27153723-27154110	H1-hESC	embryonic stem cell:	n/a	chr7:27153803-27153815 chr7:27153804-27153814 chr7:27154065-27154075 chr7:27153803-27153815 chr7:27153805-27153814 chr7:27153892-27153899 chr7:27153804-27153818

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:27153944-27153994	HEK293	kidney:	embryo
2	chr7:27153944-27153994	AG09309	skin:	n/a
3	chr7:27153944-27153994	GM12878	blood:	n/a
4	chr7:27153944-27153994	HCF	heart:	n/a
5	chr7:27153944-27153994	MCF10A-Er-Src	breast:	n/a
6	chr7:27153944-27153994	ECC-1	luminal epithelium:	n/a
7	chr7:27153944-27153994	HCM	heart:	n/a
8	chr7:27153944-27153994	SAEC	small airway:	n/a
9	chr7:27153944-27153994	U87	brain:	n/a
10	chr7:27153944-27153994	HUVEC	blood vessel:	n/a
11	chr7:27153944-27153994	SKMC	muscle:	n/a
12	chr7:27153944-27153994	NHBE	bronchial:	n/a
13	chr7:27153944-27153994	K562	blood:	n/a
14	chr7:27153944-27153994	HRCEpiC	kidney:	n/a
15	chr7:27153944-27153994	Caco-2	colon:	n/a
16	chr7:27153944-27153994	HPAEpiC	pulmonary alveolar:	n/a
17	chr7:27153944-27153994	NH-A	brain:	n/a
18	chr7:27153944-27153994	SK-N-SH_RA	brain:	n/a
19	chr7:27153944-27153994	HRPEpiC	eye:	n/a
20	chr7:27153944-27153994	HNPCEpiC	eye:	n/a
21	chr7:27153944-27153994	MCF-7	breast:	n/a
22	chr7:27153944-27153994	HRE	kidney:	n/a
23	chr7:27153944-27153994	AG04449	skin:	fetal
24	chr7:27153944-27153994	IMR90	lung:	fetal
25	chr7:27153944-27153994	CMK	blood:	n/a
26	chr7:27153944-27153994	Hela-S3	cervix:	n/a
27	chr7:27153944-27153994	H1-hESC	embryonic stem cell:	embryo
28	chr7:27153944-27153994	PFSK-1	brain:	n/a
29	chr7:27153944-27153994	NHDF-neo	bronchial:	n/a
30	chr7:27153944-27153994	NT2-D1	testis:	n/a
31	chr7:27153944-27153994	ProgFib	skin:	n/a
32	chr7:27153944-27153994	HepG2	liver:	n/a
33	chr7:27153944-27153994	HAEpiC	amniotic membrane:	n/a
34	chr7:27153944-27153994	BJ	skin:	n/a
35	chr7:27153944-27153994	A549	lung:	n/a
36	chr7:27153944-27153994	NB4	blood:	n/a
37	chr7:27153944-27153994	GM06990	blood:	n/a
38	chr7:27153944-27153994	HEEpiC	esophagus:	n/a
39	chr7:27153944-27153994	T-47D	breast:	n/a
40	chr7:27153944-27153994	AG10803	skin:	n/a
41	chr7:27153944-27153994	HMEC	breast:	n/a
42	chr7:27153944-27153994	SK-N-MC	brain:	n/a
43	chr7:27153944-27153994	AG04450	lung:	fetal
44	chr7:27153944-27153994	PANC-1	pancreas:	n/a
45	chr7:27153944-27153994	Hepatocyte	liver:	n/a
46	chr7:27153944-27153994	PrEC	prostate:	n/a
47	chr7:27153944-27153994	Jurkat	blood:	n/a
48	chr7:27153944-27153994	RPTEC	kidney:	n/a
49	chr7:27153944-27153994	SK-N-SH	brain:	n/a
50	chr7:27153944-27153994	HCT-116	colon:	n/a

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:27153704..27155716-chr7:27164230..27167167,2	MCF-7	breast:
2	7:27143270-27156413..7:27162022-27164727	H1-hESC	embryonic stem cell:	embryo
3	chr1:22351593..22352551-chr7:27153377..27154126,2	Hela-S3	cervix:

No data

Variant related genes	Relation type
HOXA-AS2	TF binding region
HOXA3	TF binding region
HOXA-AS2	CpG island
HOXA3	CpG island
ENSG00000105997	Chromatin interaction
ENSG00000218510	Chromatin interaction
ENSG00000253552	Chromatin interaction

Extended variants
information (count: 40 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:40 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1025538	chr7:26482342-27376045	Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	213 gene(s)	inside rSNPs	diseases
2	nsv538805	chr7:26482342-27376045	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Strong transcription Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	213 gene(s)	inside rSNPs	diseases
3	nsv1018709	chr7:26990384-27216552	Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
4	nsv538806	chr7:26990384-27216552	Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
5	nsv887856	chr7:27073731-27297791	Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
6	nsv824038	chr7:27119294-27284522	Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
7	nsv887857	chr7:27120689-27229549	Bivalent Enhancer Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	176 gene(s)	inside rSNPs	diseases
8	nsv824039	chr7:27121825-27294951	Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
9	nsv824040	chr7:27121870-27295010	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
10	nsv887858	chr7:27127231-27188659	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	57 gene(s)	inside rSNPs	diseases
11	nsv887860	chr7:27127231-27196069	Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
12	nsv887859	chr7:27127231-27196113	Bivalent Enhancer Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
13	nsv887861	chr7:27127231-27206688	Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
14	nsv887862	chr7:27127231-27217359	Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	141 gene(s)	inside rSNPs	diseases
15	nsv887863	chr7:27127231-27243106	Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
16	nsv887864	chr7:27127231-27243962	Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
17	nsv887865	chr7:27127231-27247279	Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
18	nsv887866	chr7:27127231-27248373	Bivalent/Poised TSS Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
19	nsv887867	chr7:27127231-27252246	Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
20	nsv824041	chr7:27128039-27294951	Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	183 gene(s)	inside rSNPs	diseases
21	nsv606463	chr7:27135314-27182245	Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
22	nsv887868	chr7:27135314-27202289	Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
23	nsv887869	chr7:27135314-27297791	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
24	nsv887870	chr7:27136308-27154737	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
25	nsv887871	chr7:27136308-27179814	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
26	nsv887872	chr7:27136308-27181437	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Enhancers Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
27	nsv887873	chr7:27136308-27186495	Bivalent/Poised TSS Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
28	nsv887874	chr7:27136308-27196069	Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
29	nsv606464	chr7:27138478-27168590	Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
30	nsv1020608	chr7:27139892-27324004	Bivalent Enhancer Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
31	nsv538807	chr7:27139892-27324004	Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
32	nsv1033316	chr7:27140645-27237951	Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
33	nsv606465	chr7:27143757-27229549	Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	174 gene(s)	inside rSNPs	diseases
34	nsv606466	chr7:27145024-27197319	Bivalent/Poised TSS Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
35	nsv606467	chr7:27145100-27196113	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
36	nsv887875	chr7:27145100-27243962	Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	179 gene(s)	inside rSNPs	diseases
37	nsv532118	chr7:27146920-27354205	Flanking Active TSS Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
38	esv3409585	chr7:27152452-27155000	Flanking Bivalent TSS/Enh Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
39	nsv5674	chr7:27152562-27197341	Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
40	esv3369283	chr7:27152827-27154725	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:71 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27145800-27162800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
2	chr7:27146400-27169600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr7:27146800-27159000	Weak transcription	Primary hematopoietic stem cells	blood
4	chr7:27150000-27158400	Active TSS	Aorta	Aorta
5	chr7:27150400-27154600	Bivalent/Poised TSS	NH-A	brain
6	chr7:27151000-27158200	Active TSS	Breast Myoepithelial Primary Cells	Breast
7	chr7:27151400-27154000	Active TSS	Fetal Stomach	stomach
8	chr7:27151400-27155000	Weak transcription	HepG2	liver
9	chr7:27151600-27154000	Active TSS	NHLF	lung
10	chr7:27151600-27156000	Active TSS	Fetal Kidney	kidney
11	chr7:27151600-27156800	Bivalent/Poised TSS	Fetal Lung	lung
12	chr7:27151600-27159200	Active TSS	Duodenum Smooth Muscle	Duodenum
13	chr7:27151800-27157000	Active TSS	Right Atrium	heart
14	chr7:27152000-27154000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr7:27152000-27154000	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr7:27152200-27154000	Active TSS	Placenta Amnion	Placenta Amnion
17	chr7:27152200-27154000	Active TSS	A549	lung
18	chr7:27152600-27154000	Active TSS	Stomach Mucosa	stomach
19	chr7:27152600-27154000	Active TSS	HSMM	muscle
20	chr7:27152600-27154600	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
21	chr7:27152600-27154800	Active TSS	Fetal Muscle Trunk	muscle
22	chr7:27152600-27157800	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr7:27152600-27158000	Active TSS	Esophagus	oesophagus
24	chr7:27152800-27154000	Active TSS	HSMMtube	muscle
25	chr7:27152800-27154200	Active TSS	Thymus	Thymus
26	chr7:27152800-27156800	Active TSS	Lung	lung
27	chr7:27152800-27169400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
28	chr7:27153000-27154000	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
29	chr7:27153000-27154000	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
30	chr7:27153000-27154000	Active TSS	Colon Smooth Muscle	Colon
31	chr7:27153000-27154000	Active TSS	Psoas Muscle	Psoas
32	chr7:27153000-27154000	Active TSS	Osteobl	bone
33	chr7:27153000-27154600	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
34	chr7:27153000-27154600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
35	chr7:27153200-27154000	Active TSS	Muscle Satellite Cultured Cells	--
36	chr7:27153200-27154000	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
37	chr7:27153200-27154000	Active TSS	Duodenum Mucosa	Duodenum
38	chr7:27153200-27154000	Bivalent/Poised TSS	Fetal Intestine Small	intestine
39	chr7:27153200-27154000	Active TSS	Rectal Mucosa Donor 29	rectum
40	chr7:27153200-27154000	Active TSS	Rectal Mucosa Donor 31	rectum
41	chr7:27153200-27154000	Active TSS	Rectal Smooth Muscle	rectum
42	chr7:27153200-27154200	Active TSS	Colonic Mucosa	Colon
43	chr7:27153200-27155400	Bivalent/Poised TSS	Pancreatic Islets	Pancreatic Islet
44	chr7:27153200-27157400	Active TSS	Stomach Smooth Muscle	stomach
45	chr7:27153400-27154000	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin01	Skin
46	chr7:27153400-27154000	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr7:27153400-27154800	Weak transcription	Pancreas	Pancrea
48	chr7:27153400-27155000	Weak transcription	Gastric	stomach
49	chr7:27153600-27154800	Enhancers	Sigmoid Colon	Sigmoid Colon
50	chr7:27153600-27155200	Enhancers	NHDF-Ad	bronchial

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links