Variant report

Variant	rs189866
Chromosome Location	chr14:69227099-69227100
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69225183..69228244-chr14:69230057..69231827,3	K562	blood:
2	chr14:69224787..69226758-chr14:69226780..69228509,2	MCF-7	breast:
3	chr14:69217775..69219892-chr14:69226719..69229166,2	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs194726	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs194753	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs194754	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs194755	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456332	chr14:69216412-69230080	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv564963	chr14:69216412-69230080	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:71 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69212600-69229200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr14:69218600-69230800	Enhancers	Fetal Muscle Leg	muscle
3	chr14:69218600-69231600	Enhancers	Fetal Heart	heart
4	chr14:69218800-69230800	Enhancers	Fetal Intestine Small	intestine
5	chr14:69220800-69227400	Enhancers	Fetal Muscle Trunk	muscle
6	chr14:69221200-69229200	Weak transcription	Osteobl	bone
7	chr14:69221600-69229600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr14:69221600-69229600	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr14:69222600-69230200	Enhancers	Placenta	Placenta
10	chr14:69222600-69235600	Enhancers	Ovary	ovary
11	chr14:69222800-69227800	Enhancers	HSMMtube	muscle
12	chr14:69223000-69227200	Enhancers	Primary hematopoietic stem cells short term culture	blood
13	chr14:69223200-69230200	Weak transcription	Duodenum Smooth Muscle	Duodenum
14	chr14:69223400-69227800	Enhancers	HSMM	muscle
15	chr14:69224000-69227800	Enhancers	Fetal Lung	lung
16	chr14:69224600-69228000	Weak transcription	Esophagus	oesophagus
17	chr14:69224600-69229400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr14:69224600-69229600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr14:69224600-69229600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr14:69224600-69229800	Weak transcription	Thymus	Thymus
21	chr14:69224800-69227200	Enhancers	Primary neutrophils fromperipheralblood	blood
22	chr14:69224800-69231400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
23	chr14:69224800-69237200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
24	chr14:69225000-69227200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr14:69225000-69227600	Weak transcription	Duodenum Mucosa	Duodenum
26	chr14:69225000-69228000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
27	chr14:69225000-69229200	Weak transcription	Colon Smooth Muscle	Colon
28	chr14:69225000-69229400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr14:69225000-69237000	Weak transcription	Primary T helper cells fromperipheralblood	blood
30	chr14:69225200-69227200	Enhancers	Breast Myoepithelial Primary Cells	Breast
31	chr14:69225200-69229200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
32	chr14:69225200-69229200	Weak transcription	Brain Inferior Temporal Lobe	brain
33	chr14:69225200-69237000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
34	chr14:69225400-69227200	Weak transcription	Brain Hippocampus Middle	brain
35	chr14:69225400-69229000	Weak transcription	Liver	Liver
36	chr14:69225400-69229200	Weak transcription	Brain Anterior Caudate	brain
37	chr14:69225400-69229800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
38	chr14:69225400-69229800	Weak transcription	Colonic Mucosa	Colon
39	chr14:69225400-69229800	Weak transcription	NHDF-Ad	bronchial
40	chr14:69225600-69227800	Weak transcription	Spleen	Spleen
41	chr14:69225600-69229200	Weak transcription	Gastric	stomach
42	chr14:69225600-69229400	Enhancers	K562	blood
43	chr14:69225600-69229800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
44	chr14:69225800-69228000	Weak transcription	Lung	lung
45	chr14:69225800-69237800	Weak transcription	Skeletal Muscle Female	skeletal muscle
46	chr14:69226000-69227200	Enhancers	HMEC	breast
47	chr14:69226000-69227400	Enhancers	Muscle Satellite Cultured Cells	--
48	chr14:69226000-69228400	Enhancers	HepG2	liver
49	chr14:69226000-69230200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr14:69226000-69234400	Weak transcription	Primary hematopoietic stem cells	blood

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