Variant report

Variant	rs189897701
Chromosome Location	chr10:94638039-94638040
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:94333639..94335354-chr10:94637611..94639541,2	MCF-7	breast:
2	chr10:94607070..94611530-chr10:94637347..94641279,5	MCF-7	breast:

Variant related genes	Relation type
ENSG00000138190	Chromatin interaction
ENSG00000119912	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1041805	chr10:94624759-94699623	Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
2	nsv895898	chr10:94628274-94810665	Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
3	nsv1039122	chr10:94636267-94693706	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94620000-94657600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr10:94624400-94646000	Weak transcription	Fetal Intestine Small	intestine
3	chr10:94633200-94640000	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr10:94633200-94640200	Weak transcription	Monocytes-CD14+_RO01746	blood
5	chr10:94633400-94656600	Weak transcription	Primary B cells from cord blood	blood
6	chr10:94634800-94650400	Weak transcription	Psoas Muscle	Psoas
7	chr10:94636000-94638200	Enhancers	Primary T helper cells fromperipheralblood	blood
8	chr10:94636000-94638400	Enhancers	Primary hematopoietic stem cells	blood
9	chr10:94636000-94638600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
10	chr10:94636000-94638600	Enhancers	K562	blood
11	chr10:94636000-94641000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr10:94636200-94639200	Enhancers	Primary hematopoietic stem cells short term culture	blood
13	chr10:94636800-94639800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr10:94636800-94640200	Enhancers	HUVEC	blood vessel
15	chr10:94637000-94638200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
16	chr10:94637000-94639800	Weak transcription	A549	lung
17	chr10:94637200-94638400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr10:94637200-94639800	Weak transcription	Brain Angular Gyrus	brain
19	chr10:94637200-94651800	Weak transcription	Sigmoid Colon	Sigmoid Colon
20	chr10:94637400-94638200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
21	chr10:94637400-94638600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr10:94637400-94639800	Weak transcription	Liver	Liver
23	chr10:94637400-94640000	Weak transcription	Primary neutrophils fromperipheralblood	blood
24	chr10:94637800-94638200	Enhancers	Skeletal Muscle Female	skeletal muscle
25	chr10:94637800-94638400	Enhancers	Right Atrium	heart
26	chr10:94638000-94638600	Enhancers	Primary T cells from cord blood	blood

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