Variant report

Variant	rs189934486
Chromosome Location	chr14:81271419-81271420
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv832840	chr14:81270033-81423583	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81192800-81305400	Weak transcription	Primary B cells from cord blood	blood
2	chr14:81246800-81271600	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr14:81251800-81282600	Weak transcription	A549	lung
4	chr14:81259400-81274000	Weak transcription	Aorta	Aorta
5	chr14:81259400-81274000	Weak transcription	Pancreas	Pancrea
6	chr14:81259400-81274200	Weak transcription	Thymus	Thymus
7	chr14:81259400-81278400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr14:81265600-81277200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr14:81265600-81284400	Weak transcription	Fetal Thymus	thymus
10	chr14:81265800-81274600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr14:81267400-81273800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr14:81267400-81284200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr14:81267400-81284800	Weak transcription	HSMM	muscle
14	chr14:81269600-81273000	Weak transcription	Fetal Lung	lung
15	chr14:81269600-81284400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr14:81270200-81273600	Weak transcription	Dnd41	blood
17	chr14:81271200-81271800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr14:81271200-81272200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr14:81271400-81272000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr14:81271400-81272200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr14:81271400-81272200	Enhancers	NHDF-Ad	bronchial
22	chr14:81271400-81272200	Enhancers	Osteobl	bone

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links