Variant report

Variant	rs189976516
Chromosome Location	chr13:76297647-76297648
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949152	chr13:76211453-76366622	Enhancers Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv900579	chr13:76244056-76307981	Enhancers Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1091	chr13:76282392-76327906	ZNF genes & repeats Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv976261	chr13:76297598-76301199	Weak transcription Genic enhancers Flanking Active TSS Enhancers Strong transcription Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:76279400-76308000	Weak transcription	Left Ventricle	heart
2	chr13:76283600-76308000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr13:76288200-76297800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr13:76290600-76298000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr13:76290600-76298200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr13:76290600-76298200	Weak transcription	Aorta	Aorta
7	chr13:76290600-76298400	Weak transcription	Fetal Lung	lung
8	chr13:76290800-76299000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr13:76291600-76298000	Strong transcription	HSMM	muscle
10	chr13:76292800-76297800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr13:76293800-76298000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr13:76294000-76300200	Weak transcription	HSMMtube	muscle
13	chr13:76294400-76297800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr13:76294400-76299000	Weak transcription	NHLF	lung
15	chr13:76294800-76297800	Weak transcription	Muscle Satellite Cultured Cells	--
16	chr13:76294800-76321800	Weak transcription	NH-A	brain
17	chr13:76295000-76298000	Weak transcription	Stomach Mucosa	stomach
18	chr13:76297000-76300800	Enhancers	Hela-S3	cervix
19	chr13:76297200-76297800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr13:76297400-76297800	Weak transcription	Placenta	Placenta
21	chr13:76297600-76298800	Genic enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr13:76297600-76299800	Enhancers	NHDF-Ad	bronchial
23	chr13:76297600-76300000	Enhancers	Osteobl	bone

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