The 2.0 version of rSNPBase

Variant report

Variant rs190034486
Chromosome Location chr12:122848753-122848754
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:122812800-122850600 Weak transcription H1 Cell Line embryonic stem cell
2 chr12:122818400-122852800 Weak transcription Stomach Mucosa stomach
3 chr12:122837000-122851200 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr12:122837600-122856000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr12:122838000-122868000 Weak transcription Fetal Lung lung
6 chr12:122838600-122852200 Weak transcription Small Intestine intestine
7 chr12:122839400-122850200 Weak transcription Right Atrium heart
8 chr12:122839600-122851400 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr12:122839600-122861800 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr12:122839600-122871000 Weak transcription Fetal Kidney kidney
11 chr12:122840000-122852000 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr12:122840000-122861800 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr12:122840000-122862600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr12:122840200-122851000 Weak transcription NH-A brain
15 chr12:122840200-122857800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr12:122841000-122872600 Weak transcription Fetal Brain Male brain
17 chr12:122843000-122848800 Strong transcription Primary neutrophils fromperipheralblood blood
18 chr12:122843000-122848800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr12:122843000-122849000 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr12:122843000-122849200 Strong transcription Placenta Placenta
21 chr12:122843200-122849000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr12:122843200-122849200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr12:122843400-122848800 Strong transcription Primary monocytes fromperipheralblood blood
24 chr12:122843400-122848800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr12:122843400-122851000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
26 chr12:122843600-122848800 Strong transcription Primary hematopoietic stem cells short term culture blood
27 chr12:122843800-122848800 Strong transcription Primary T helper cells PMA-I stimulated --
28 chr12:122843800-122848800 Strong transcription Primary T regulatory cells fromperipheralblood blood
29 chr12:122843800-122848800 Strong transcription Colon Smooth Muscle Colon
30 chr12:122843800-122848800 Strong transcription Duodenum Mucosa Duodenum
31 chr12:122843800-122849200 Strong transcription Breast Myoepithelial Primary Cells Breast
32 chr12:122843800-122849200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr12:122844000-122849200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr12:122844200-122848800 Strong transcription HUES64 Cell Line embryonic stem cell
35 chr12:122844400-122862000 Weak transcription H9 Cell Line embryonic stem cell
36 chr12:122844600-122851000 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr12:122844800-122856000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr12:122846000-122851000 Weak transcription HMEC breast
39 chr12:122846000-122851200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr12:122846000-122851200 Weak transcription Brain Angular Gyrus brain
41 chr12:122846000-122851400 Weak transcription Brain Anterior Caudate brain
42 chr12:122846000-122854000 Weak transcription GM12878-XiMat blood
43 chr12:122846000-122865600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr12:122846000-122883800 Weak transcription Aorta Aorta
45 chr12:122846200-122850000 Weak transcription HUVEC blood vessel
46 chr12:122846200-122851000 Weak transcription K562 blood
47 chr12:122846200-122851000 Weak transcription Osteobl bone
48 chr12:122846200-122851200 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr12:122846200-122851400 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr12:122846200-122856000 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015