Variant report

Variant	rs190088587
Chromosome Location	chr7:120637038-120637039
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:120621518..120649031-chr7:120712706..120728931,108	K562	blood:
2	chr7:120624020..120645873-chr7:120713358..120727138,77	K562	blood:

Variant related genes	Relation type
ENSG00000212628	Chromatin interaction
ENSG00000106034	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831114	chr7:120595624-120804510	Weak transcription Enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv608327	chr7:120633006-120873078	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	esv2753621	chr7:120635049-120800049	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
4	nsv1030988	chr7:120636796-120672504	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:72 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120631200-120640400	Weak transcription	Brain Anterior Caudate	brain
2	chr7:120632400-120641400	Transcr. at gene 5' and 3'	K562	blood
3	chr7:120634000-120637400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr7:120634200-120644000	Weak transcription	Spleen	Spleen
5	chr7:120634600-120638400	Enhancers	Primary neutrophils fromperipheralblood	blood
6	chr7:120634800-120637200	Weak transcription	NHLF	lung
7	chr7:120634800-120637800	Enhancers	Primary hematopoietic stem cells	blood
8	chr7:120635000-120637400	Enhancers	Aorta	Aorta
9	chr7:120635000-120640800	Enhancers	Dnd41	blood
10	chr7:120635200-120637200	Enhancers	Primary T helper cells PMA-I stimulated	--
11	chr7:120635200-120637200	Enhancers	Primary T killer memory cells from peripheral blood	blood
12	chr7:120635200-120638600	Weak transcription	Ovary	ovary
13	chr7:120635400-120637600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
14	chr7:120635800-120637200	Enhancers	Primary B cells from peripheral blood	blood
15	chr7:120635800-120637200	Enhancers	Primary T cells fromperipheralblood	blood
16	chr7:120635800-120637400	Enhancers	Primary B cells from cord blood	blood
17	chr7:120635800-120637400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
18	chr7:120635800-120639800	Enhancers	Colon Smooth Muscle	Colon
19	chr7:120636000-120637200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
20	chr7:120636000-120637200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr7:120636000-120638200	Enhancers	Left Ventricle	heart
22	chr7:120636000-120639600	Enhancers	Fetal Stomach	stomach
23	chr7:120636000-120639600	Enhancers	NHDF-Ad	bronchial
24	chr7:120636200-120637200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr7:120636200-120637200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
26	chr7:120636200-120637200	Enhancers	Primary T helper cells fromperipheralblood	blood
27	chr7:120636200-120637200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
28	chr7:120636200-120637200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr7:120636200-120637200	Enhancers	Psoas Muscle	Psoas
30	chr7:120636200-120637200	Enhancers	Right Ventricle	heart
31	chr7:120636200-120637200	Genic enhancers	HSMM	muscle
32	chr7:120636200-120637400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr7:120636200-120637400	Enhancers	Primary T helper naive cells from peripheral blood	blood
34	chr7:120636200-120637400	Enhancers	Fetal Heart	heart
35	chr7:120636200-120637400	Enhancers	Osteobl	bone
36	chr7:120636200-120637600	Enhancers	Primary T cells from cord blood	blood
37	chr7:120636200-120640800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
38	chr7:120636400-120637200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
39	chr7:120636400-120637200	Enhancers	Small Intestine	intestine
40	chr7:120636400-120637200	Enhancers	Hela-S3	cervix
41	chr7:120636400-120637200	Enhancers	HMEC	breast
42	chr7:120636400-120637200	Enhancers	NHEK	skin
43	chr7:120636400-120640600	Enhancers	Skeletal Muscle Female	skeletal muscle
44	chr7:120636600-120637200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr7:120636600-120637200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
46	chr7:120636600-120637200	Enhancers	HSMMtube	muscle
47	chr7:120636600-120637400	Enhancers	Fetal Kidney	kidney
48	chr7:120636600-120637600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
49	chr7:120636600-120637800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
50	chr7:120636800-120637200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood

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