Variant report

Variant	rs190197438
Chromosome Location	chr6:150692889-150692890
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2763602	chr6:150581193-150720666	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	esv3393784	chr6:150689259-150693557	Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases
3	esv3370261	chr6:150692709-150694807	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150689200-150693200	Enhancers	Fetal Intestine Large	intestine
2	chr6:150689200-150693400	Enhancers	Fetal Intestine Small	intestine
3	chr6:150691000-150698200	Weak transcription	Stomach Mucosa	stomach
4	chr6:150691600-150700200	Weak transcription	Lung	lung
5	chr6:150691800-150695000	Enhancers	Liver	Liver
6	chr6:150692200-150694600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr6:150692200-150698200	Weak transcription	Duodenum Mucosa	Duodenum
8	chr6:150692400-150695200	Enhancers	Muscle Satellite Cultured Cells	--
9	chr6:150692600-150694000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr6:150692800-150693200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr6:150692800-150695000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr6:150692800-150695400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr6:150692800-150695600	Enhancers	Osteobl	bone

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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