The 2.0 version of rSNPBase
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Variant report
Variant
rs190241847
Chromosome Location
chr10:26021296-26021297
allele
A/C
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:1)
LncRNA region (count:2)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:1 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr10:26020442..26022005-chr10:26023393..26025728,2
K562
blood:
(count:2 , 50 per page) page:
1
No.
lncRNA name
Chromosome Location
lncRNA alias
1
lnc-GPR158-2
chr10:26020550-26021864
NONHSAT011808
2
lnc-GPR158-2
chr10:26020550-26021864
NR_108067
No data
No data
No data
Extended variants information (count: 1 )
Associated traits (count: 0)
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
nsv894973
chr10:26020424-26043071
Enhancers Weak transcription Flanking Active TSS Active TSS
Chromatin interactive regionlncRNA
n/a
inside rSNPs
n/a
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links