Variant report
| Variant | rs190244880 |
|---|---|
| Chromosome Location | chr12:42538794-42538795 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:42534600-42538800 | Active TSS | GM12878-XiMat | blood |
| 2 | chr12:42536800-42539000 | Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 3 | chr12:42536800-42539400 | Active TSS | Pancreatic Islets | Pancreatic Islet |
| 4 | chr12:42537000-42539000 | Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
| 5 | chr12:42537000-42539000 | Active TSS | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 6 | chr12:42537000-42539000 | Active TSS | NHLF | lung |
| 7 | chr12:42537000-42539200 | Active TSS | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 8 | chr12:42537000-42539200 | Active TSS | Lung | lung |
| 9 | chr12:42537000-42539400 | Active TSS | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 10 | chr12:42537000-42539600 | Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 11 | chr12:42537200-42539000 | Active TSS | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 12 | chr12:42537200-42539000 | Active TSS | Primary Natural Killer cells fromperipheralblood | blood |
| 13 | chr12:42537200-42539200 | Active TSS | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 14 | chr12:42537200-42539200 | Active TSS | A549 | lung |
| 15 | chr12:42537200-42539200 | Active TSS | HSMMtube | muscle |
| 16 | chr12:42537200-42539400 | Flanking Active TSS | Primary B cells from cord blood | blood |
| 17 | chr12:42537200-42539400 | Active TSS | Left Ventricle | heart |
| 18 | chr12:42537200-42539400 | Active TSS | Right Atrium | heart |
| 19 | chr12:42537400-42538800 | Active TSS | HMEC | breast |
| 20 | chr12:42537400-42538800 | Active TSS | NHDF-Ad | bronchial |
| 21 | chr12:42537400-42539000 | Active TSS | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 22 | chr12:42537400-42539000 | Active TSS | Fetal Intestine Small | intestine |
| 23 | chr12:42537400-42539000 | Active TSS | Placenta Amnion | Placenta Amnion |
| 24 | chr12:42537400-42539000 | Active TSS | NHEK | skin |
| 25 | chr12:42537400-42539200 | Active TSS | ES-I3 Cell Line | embryonic stem cell |
| 26 | chr12:42537400-42539200 | Active TSS | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 27 | chr12:42537400-42539200 | Active TSS | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 28 | chr12:42537400-42539200 | Active TSS | iPS DF 6.9 Cell Line | embryonic stem cell |
| 29 | chr12:42537400-42539200 | Active TSS | Aorta | Aorta |
| 30 | chr12:42537400-42539200 | Active TSS | Esophagus | oesophagus |
| 31 | chr12:42537400-42539200 | Active TSS | Ovary | ovary |
| 32 | chr12:42537400-42539200 | Active TSS | Pancreas | Pancrea |
| 33 | chr12:42537400-42539400 | Active TSS | Fetal Muscle Trunk | muscle |
| 34 | chr12:42537400-42539600 | Active TSS | H9 Cell Line | embryonic stem cell |
| 35 | chr12:42537400-42539600 | Active TSS | Colonic Mucosa | Colon |
| 36 | chr12:42537400-42540000 | Active TSS | ES-WA7 Cell Line | embryonic stem cell |
| 37 | chr12:42537600-42538800 | Active TSS | Muscle Satellite Cultured Cells | -- |
| 38 | chr12:42537600-42538800 | Active TSS | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 39 | chr12:42537600-42539000 | Active TSS | H1 Cell Line | embryonic stem cell |
| 40 | chr12:42537600-42539000 | Active TSS | H9 Derived Neuron Cultured Cells | ES cell derived |
| 41 | chr12:42537600-42539000 | Active TSS | IMR90 fetal lung fibroblasts Cell Line | lung |
| 42 | chr12:42537600-42539000 | Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 43 | chr12:42537600-42539000 | Active TSS | Brain Substantia Nigra | brain |
| 44 | chr12:42537600-42539000 | Active TSS | Duodenum Smooth Muscle | Duodenum |
| 45 | chr12:42537600-42539000 | Active TSS | Fetal Kidney | kidney |
| 46 | chr12:42537600-42539000 | Active TSS | Fetal Lung | lung |
| 47 | chr12:42537600-42539000 | Active TSS | Placenta | Placenta |
| 48 | chr12:42537600-42539000 | Active TSS | Fetal Stomach | stomach |
| 49 | chr12:42537600-42539000 | Active TSS | Fetal Thymus | thymus |
| 50 | chr12:42537600-42539000 | Active TSS | Rectal Mucosa Donor 29 | rectum |
