Variant report

Variant	rs190347829
Chromosome Location	chr13:76589703-76589704
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832649	chr13:76424872-76657891	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv1054431	chr13:76460431-76885094	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv541837	chr13:76460431-76885094	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	esv3513085	chr13:76589292-76592118	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv3513096	chr13:76589330-76592073	Enhancers Flanking Active TSS Active TSS Weak transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	esv3513107	chr13:76589330-76592073	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	nsv826721	chr13:76589453-76592035	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:76584600-76593800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr13:76586000-76590200	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr13:76587400-76589800	Enhancers	Placenta Amnion	Placenta Amnion
4	chr13:76587600-76590200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr13:76588400-76589800	Enhancers	Brain Cingulate Gyrus	brain
6	chr13:76588400-76589800	Enhancers	HMEC	breast
7	chr13:76588400-76590000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr13:76588600-76589800	Enhancers	Brain Hippocampus Middle	brain
9	chr13:76589200-76589800	Enhancers	Fetal Lung	lung
10	chr13:76589400-76589800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr13:76589400-76589800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr13:76589400-76589800	Enhancers	Brain Substantia Nigra	brain
13	chr13:76589400-76589800	Flanking Active TSS	Fetal Heart	heart
14	chr13:76589400-76589800	Enhancers	NH-A	brain
15	chr13:76589400-76593200	Weak transcription	Brain Inferior Temporal Lobe	brain
16	chr13:76589400-76593400	Weak transcription	Brain Angular Gyrus	brain
17	chr13:76589400-76593600	Weak transcription	Aorta	Aorta
18	chr13:76589400-76593800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr13:76589400-76601400	Weak transcription	K562	blood
20	chr13:76589600-76591000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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