The 2.0 version of rSNPBase

Variant report

Variant rs190465019
Chromosome Location chr1:114183264-114183265
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114159000-114195000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr1:114159200-114194800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr1:114161600-114184600 Weak transcription Colon Smooth Muscle Colon
4 chr1:114161600-114184600 Weak transcription HepG2 liver
5 chr1:114161800-114199800 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr1:114162200-114184600 Weak transcription Left Ventricle heart
7 chr1:114169200-114189400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr1:114169400-114184600 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr1:114170800-114184600 Weak transcription Stomach Smooth Muscle stomach
10 chr1:114171600-114241400 Weak transcription Right Ventricle heart
11 chr1:114172400-114184600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr1:114172400-114192600 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr1:114173000-114184600 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr1:114173000-114184600 Weak transcription Adipose Nuclei Adipose
15 chr1:114173000-114214400 Weak transcription Esophagus oesophagus
16 chr1:114173000-114226800 Weak transcription Aorta Aorta
17 chr1:114173200-114184600 Weak transcription Fetal Muscle Trunk muscle
18 chr1:114173200-114184600 Weak transcription Ovary ovary
19 chr1:114173400-114184600 Weak transcription Primary T cells from cord blood blood
20 chr1:114173600-114183800 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr1:114173600-114184600 Weak transcription Liver Liver
22 chr1:114173600-114195000 Weak transcription HMEC breast
23 chr1:114173600-114206000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:114173800-114184600 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr1:114173800-114184600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:114173800-114196200 Weak transcription Gastric stomach
27 chr1:114173800-114199600 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr1:114173800-114201800 Weak transcription Colonic Mucosa Colon
29 chr1:114173800-114201800 Weak transcription Lung lung
30 chr1:114173800-114214400 Weak transcription Pancreas Pancrea
31 chr1:114173800-114236000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr1:114174000-114184600 Weak transcription Duodenum Mucosa Duodenum
33 chr1:114174000-114184600 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr1:114179800-114239600 Weak transcription Spleen Spleen
35 chr1:114180400-114184600 Weak transcription Brain Angular Gyrus brain
36 chr1:114181200-114199400 Weak transcription Rectal Smooth Muscle rectum
37 chr1:114181400-114184600 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr1:114181800-114183400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr1:114181800-114199800 Weak transcription Fetal Brain Female brain
40 chr1:114182000-114184600 Weak transcription Brain Substantia Nigra brain
41 chr1:114182000-114219600 Weak transcription Fetal Kidney kidney
42 chr1:114182200-114189200 Weak transcription Placenta Placenta
43 chr1:114182200-114197600 Weak transcription Brain Hippocampus Middle brain
44 chr1:114182600-114187800 Weak transcription Fetal Stomach stomach
45 chr1:114182600-114189400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:114182600-114189400 Weak transcription Osteobl bone
47 chr1:114182600-114194800 Weak transcription HSMM muscle
48 chr1:114182600-114206200 Weak transcription Hela-S3 cervix
49 chr1:114182800-114183400 ZNF genes & repeats Fetal Lung lung
50 chr1:114182800-114184400 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015