The 2.0 version of rSNPBase

Variant report

Variant rs190465907
Chromosome Location chr4:79732571-79732572
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:79700200-79732800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr4:79714400-79748400 Weak transcription Aorta Aorta
3 chr4:79720800-79747800 Weak transcription Osteobl bone
4 chr4:79721200-79741400 Weak transcription Thymus Thymus
5 chr4:79721600-79747200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr4:79726600-79747800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr4:79727800-79748200 Weak transcription NHEK skin
8 chr4:79728400-79747200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr4:79728600-79733600 Weak transcription Primary B cells from cord blood blood
10 chr4:79728600-79737800 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr4:79728600-79738200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr4:79728600-79747200 Weak transcription Primary monocytes fromperipheralblood blood
13 chr4:79728800-79735000 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr4:79729000-79747200 Weak transcription Fetal Muscle Trunk muscle
15 chr4:79729600-79734600 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr4:79729800-79735000 Weak transcription Primary hematopoietic stem cells blood
17 chr4:79730000-79733600 Enhancers Primary B cells from peripheral blood blood
18 chr4:79730400-79741400 Weak transcription Primary T cells from cord blood blood
19 chr4:79730800-79733800 Enhancers Fetal Intestine Large intestine
20 chr4:79731000-79733400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
21 chr4:79731200-79732600 Enhancers HUES48 Cell Line embryonic stem cell
22 chr4:79731200-79732800 Enhancers HUES64 Cell Line embryonic stem cell
23 chr4:79731400-79732600 Enhancers Fetal Intestine Small intestine
24 chr4:79731400-79735200 Weak transcription NHDF-Ad bronchial
25 chr4:79731400-79748600 Weak transcription Pancreas Pancrea
26 chr4:79731600-79747400 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr4:79731600-79748000 Weak transcription Fetal Muscle Leg muscle
28 chr4:79731800-79732600 Enhancers K562 blood
29 chr4:79731800-79736000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr4:79731800-79738400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr4:79731800-79747200 Weak transcription Left Ventricle heart
32 chr4:79731800-79747400 Weak transcription Liver Liver
33 chr4:79732000-79733200 Weak transcription Right Atrium heart
34 chr4:79732000-79735600 Weak transcription Psoas Muscle Psoas
35 chr4:79732200-79732600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr4:79732200-79733200 Weak transcription Colon Smooth Muscle Colon
37 chr4:79732200-79747000 Weak transcription NHLF lung
38 chr4:79732400-79734600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr4:79732400-79735200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr4:79732400-79738400 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr4:79732400-79739600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr4:79732400-79747200 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr4:79732400-79747800 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr4:79732400-79759200 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015