Variant report

Variant	rs190625537
Chromosome Location	chr3:133132574-133132575
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:133127092..133128594-chr3:133130623..133133431,2	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877504	chr3:133122216-133172374	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	esv3356798	chr3:133131662-133135760	Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	esv16435	chr3:133132004-133137072	Flanking Active TSS Enhancers Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3430009	chr3:133132212-133137110	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv591802	chr3:133132464-133135002	Enhancers Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv591803	chr3:133132464-133136961	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv591804	chr3:133132464-133137016	Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv591805	chr3:133132496-133136961	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv591806	chr3:133132496-133137016	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:60 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133124600-133138400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr3:133131000-133132600	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr3:133131000-133133000	Enhancers	Fetal Brain Male	brain
4	chr3:133131400-133132600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr3:133131400-133132600	Enhancers	Fetal Brain Female	brain
6	chr3:133131400-133132800	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr3:133131400-133132800	Active TSS	NHLF	lung
8	chr3:133131400-133133000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr3:133131400-133133200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr3:133131600-133132600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr3:133131600-133132600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
12	chr3:133131600-133132600	Flanking Active TSS	Colon Smooth Muscle	Colon
13	chr3:133131600-133132600	Flanking Active TSS	HSMMtube	muscle
14	chr3:133131600-133132800	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr3:133131600-133132800	Active TSS	Pancreatic Islets	Pancreatic Islet
16	chr3:133131600-133132800	Active TSS	Stomach Smooth Muscle	stomach
17	chr3:133131600-133133000	Bivalent Enhancer	Fetal Muscle Leg	muscle
18	chr3:133131600-133133000	Enhancers	Placenta	Placenta
19	chr3:133131800-133132600	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr3:133131800-133132600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
21	chr3:133131800-133132600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr3:133131800-133132600	Active TSS	Right Atrium	heart
23	chr3:133131800-133132600	Enhancers	NH-A	brain
24	chr3:133131800-133132800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
25	chr3:133131800-133132800	Bivalent Enhancer	Fetal Intestine Small	intestine
26	chr3:133131800-133132800	Flanking Active TSS	Osteobl	bone
27	chr3:133131800-133133000	Enhancers	Cortex derived primary cultured neurospheres	brain
28	chr3:133131800-133133000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr3:133132000-133132600	Enhancers	Fetal Heart	heart
30	chr3:133132000-133132800	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr3:133132000-133132800	Flanking Active TSS	Brain Cingulate Gyrus	brain
32	chr3:133132000-133133000	Enhancers	Fetal Muscle Trunk	muscle
33	chr3:133132000-133133200	Enhancers	Fetal Stomach	stomach
34	chr3:133132200-133132600	Enhancers	ES-I3 Cell Line	embryonic stem cell
35	chr3:133132200-133132600	Flanking Active TSS	Adipose Nuclei	Adipose
36	chr3:133132200-133132600	Flanking Active TSS	Brain Angular Gyrus	brain
37	chr3:133132200-133132600	Flanking Active TSS	Brain Anterior Caudate	brain
38	chr3:133132200-133132600	Active TSS	Duodenum Mucosa	Duodenum
39	chr3:133132200-133132600	Enhancers	Fetal Intestine Large	intestine
40	chr3:133132200-133132600	Active TSS	Ovary	ovary
41	chr3:133132200-133132600	Flanking Active TSS	Rectal Smooth Muscle	rectum
42	chr3:133132200-133132600	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
43	chr3:133132200-133132800	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr3:133132200-133132800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
45	chr3:133132200-133132800	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr3:133132200-133132800	Flanking Active TSS	Brain Substantia Nigra	brain
47	chr3:133132200-133132800	Flanking Active TSS	Fetal Lung	lung
48	chr3:133132200-133132800	Bivalent/Poised TSS	Rectal Mucosa Donor 29	rectum
49	chr3:133132400-133132600	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
50	chr3:133132400-133132600	Active TSS	Brain Hippocampus Middle	brain

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