Variant report

(count:28 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr5:79655720-79655962	Hela-S3	cervix:	n/a	n/a
2	POLR2A	chr5:79655751-79655901	GM12878	blood:	n/a	n/a
3	TAF1	chr5:79655754-79655954	H1-hESC	embryonic stem cell:	n/a	n/a
4	POLR2A	chr5:79655817-79655888	A549	lung:	n/a	n/a
5	TAF1	chr5:79655769-79655925	Hela-S3	cervix:	n/a	n/a
6	POLR2A	chr5:79655804-79655900	A549	lung:	n/a	n/a
7	POLR2A	chr5:79655694-79655928	H1-hESC	embryonic stem cell:	n/a	n/a
8	POLR2A	chr5:79655666-79656125	GM12892	blood:	n/a	n/a
9	POLR2A	chr5:79655769-79655927	GM12891	blood:	n/a	n/a
10	POLR2A	chr5:79655784-79655913	A549	lung:	n/a	n/a
11	POLR2A	chr5:79655719-79656030	GM12878	blood:	n/a	n/a
12	POLR2A	chr5:79655771-79655897	A549	lung:	n/a	n/a
13	TAF1	chr5:79655747-79655910	Hela-S3	cervix:	n/a	n/a
14	TAF1	chr5:79655733-79655931	H1-hESC	embryonic stem cell:	n/a	n/a
15	TAF1	chr5:79655772-79655909	GM12892	blood:	n/a	n/a
16	TAF1	chr5:79655721-79655931	GM12891	blood:	n/a	n/a
17	POLR2A	chr5:79655715-79655930	Hela-S3	cervix:	n/a	n/a
18	HEY1	chr5:79655790-79655980	HepG2	liver:	n/a	n/a
19	POLR2A	chr5:79655757-79655907	H1-hESC	embryonic stem cell:	n/a	n/a
20	HEY1	chr5:79655726-79655923	K562	blood:	n/a	n/a
21	POLR2A	chr5:79655786-79655911	GM12891	blood:	n/a	n/a
22	POLR2A	chr5:79655708-79655950	GM12891	blood:	n/a	n/a
23	POLR2A	chr5:79655775-79655927	H1-hESC	embryonic stem cell:	n/a	n/a
24	HEY1	chr5:79655715-79656029	K562	blood:	n/a	n/a
25	POLR2A	chr5:79655812-79655885	HepG2	liver:	n/a	n/a
26	POLR2A	chr5:79655740-79656026	GM12878	blood:	n/a	n/a
27	POLR2A	chr5:79655695-79655947	GM12891	blood:	n/a	n/a
28	HEY1	chr5:79655737-79655941	HepG2	liver:	n/a	n/a

No data

Variant related genes	Relation type
HNRNPA1P12	TF binding region

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948807	chr5:79549207-79805765	Genic enhancers Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
2	nsv518480	chr5:79586085-79748382	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
3	esv3470535	chr5:79652549-79659514	Enhancers	TF binding region	2 gene(s)	inside rSNPs	diseases
4	esv3470536	chr5:79652549-79659514	Enhancers	TF binding region	2 gene(s)	inside rSNPs	diseases
5	esv3367208	chr5:79652593-79659443	Enhancers	TF binding region	2 gene(s)	inside rSNPs	diseases
6	esv20746	chr5:79652813-79659000	Inactive region	TF binding region	1 gene(s)	inside rSNPs	diseases
7	nsv980691	chr5:79654034-79656527	Inactive region	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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