Variant report

Variant	rs190743409
Chromosome Location	chr7:138296403-138296404
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030956	chr7:138163169-138579519	Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Genic enhancers Enhancers ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	esv993410	chr7:138295818-138297312	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3360415	chr7:138296108-138297623	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv7121	chr7:138296218-138297372	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3337894	chr7:138296325-138297293	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3342428	chr7:138296346-138297300	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3381010	chr7:138296346-138297317	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3517790	chr7:138296362-138297257	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3476848	chr7:138296381-138297277	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3355578	chr7:138296384-138297280	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3427965	chr7:138296388-138297268	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3476847	chr7:138296394-138297236	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv3476849	chr7:138296394-138297236	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv3517791	chr7:138296402-138297256	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
15	esv3517792	chr7:138296402-138297257	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:138287600-138303200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr7:138293200-138298000	Weak transcription	Fetal Lung	lung
3	chr7:138293200-138298800	Weak transcription	Fetal Kidney	kidney
4	chr7:138293200-138308400	Weak transcription	Primary T cells from cord blood	blood
5	chr7:138293600-138297400	Weak transcription	HSMMtube	muscle
6	chr7:138295800-138297200	Weak transcription	Primary hematopoietic stem cells	blood
7	chr7:138295800-138297200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr7:138295800-138297800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr7:138296000-138296800	Weak transcription	K562	blood
10	chr7:138296000-138297800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
11	chr7:138296200-138298200	Weak transcription	Pancreas	Pancrea
12	chr7:138296400-138297400	Weak transcription	HepG2	liver
13	chr7:138296400-138297600	Weak transcription	Liver	Liver
14	chr7:138296400-138298000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr7:138296400-138303600	Weak transcription	Fetal Intestine Small	intestine

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links