Variant report

Variant rs190866591
Chromosome Location chr11:57534174-57534175
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:57528800-57534200 Active TSS Right Atrium heart
2 chr11:57530400-57545800 Weak transcription Primary T helper cells PMA-I stimulated --
3 chr11:57531400-57543200 Weak transcription Primary B cells from cord blood blood
4 chr11:57531800-57534600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
5 chr11:57531800-57538200 Weak transcription Primary B cells from peripheral blood blood
6 chr11:57531800-57539800 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr11:57531800-57543200 Weak transcription Thymus Thymus
8 chr11:57532000-57534200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr11:57532200-57534200 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
10 chr11:57532200-57535200 Enhancers Brain Substantia Nigra brain
11 chr11:57532400-57534200 Enhancers Ovary ovary
12 chr11:57532400-57534600 Flanking Active TSS Brain Germinal Matrix brain
13 chr11:57532400-57535200 Active TSS GM12878-XiMat blood
14 chr11:57532600-57534200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr11:57532600-57534200 Enhancers Fetal Heart heart
16 chr11:57532600-57538200 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr11:57532800-57534200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr11:57532800-57534200 Active TSS HUES48 Cell Line embryonic stem cell
19 chr11:57532800-57534200 Enhancers Muscle Satellite Cultured Cells --
20 chr11:57532800-57534200 Enhancers Skeletal Muscle Female skeletal muscle
21 chr11:57532800-57535000 Enhancers Brain Anterior Caudate brain
22 chr11:57532800-57535200 Enhancers Cortex derived primary cultured neurospheres brain
23 chr11:57532800-57535200 Enhancers Brain Hippocampus Middle brain
24 chr11:57532800-57539800 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr11:57532800-57539800 Weak transcription NHDF-Ad bronchial
26 chr11:57532800-57541800 Weak transcription H1 Cell Line embryonic stem cell
27 chr11:57532800-57543200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr11:57533000-57535200 Enhancers Liver Liver
29 chr11:57533000-57535400 Enhancers Small Intestine intestine
30 chr11:57533000-57536800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr11:57533000-57538000 Weak transcription Primary monocytes fromperipheralblood blood
32 chr11:57533000-57539600 Weak transcription HMEC breast
33 chr11:57533000-57539800 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr11:57533000-57539800 Weak transcription NH-A brain
35 chr11:57533200-57534200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr11:57533200-57534200 Enhancers Fetal Lung lung
37 chr11:57533200-57534200 Active TSS Rectal Mucosa Donor 29 rectum
38 chr11:57533200-57534200 Enhancers Rectal Mucosa Donor 31 rectum
39 chr11:57533200-57534400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
40 chr11:57533200-57534400 Enhancers Duodenum Smooth Muscle Duodenum
41 chr11:57533200-57534400 Flanking Active TSS Fetal Brain Female brain
42 chr11:57533200-57534800 Weak transcription HSMM muscle
43 chr11:57533200-57535000 Weak transcription Colon Smooth Muscle Colon
44 chr11:57533200-57535200 Enhancers Brain Cingulate Gyrus brain
45 chr11:57533200-57535200 Genic enhancers Fetal Intestine Small intestine
46 chr11:57533200-57537400 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr11:57533200-57538000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr11:57533200-57539800 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr11:57533200-57539800 Weak transcription Placenta Amnion Placenta Amnion
50 chr11:57533200-57539800 Weak transcription HSMMtube muscle

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