The 2.0 version of rSNPBase

Variant report

Variant rs190998161
Chromosome Location chr1:174900843-174900844
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174861400-174902400 Weak transcription Left Ventricle heart
2 chr1:174874000-174910000 Weak transcription H9 Cell Line embryonic stem cell
3 chr1:174874200-174938200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:174876800-174933600 Weak transcription Aorta Aorta
5 chr1:174886000-174907200 Weak transcription Primary T cells from cord blood blood
6 chr1:174886400-174911600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:174889600-174907400 Weak transcription Primary B cells from cord blood blood
8 chr1:174891800-174908600 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr1:174892200-174905000 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr1:174893400-174907600 Weak transcription GM12878-XiMat blood
11 chr1:174897400-174903600 Weak transcription Pancreas Pancrea
12 chr1:174897400-174910000 Weak transcription Gastric stomach
13 chr1:174897800-174907200 Weak transcription Duodenum Mucosa Duodenum
14 chr1:174898800-174910600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr1:174899600-174901000 Enhancers Brain Inferior Temporal Lobe brain
16 chr1:174899800-174915200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr1:174900000-174901000 Enhancers iPS-15b Cell Line embryonic stem cell
18 chr1:174900000-174901600 Enhancers Brain Hippocampus Middle brain
19 chr1:174900000-174902200 Weak transcription H1 Cell Line embryonic stem cell
20 chr1:174900000-174902200 Enhancers HUES64 Cell Line embryonic stem cell
21 chr1:174900200-174901000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:174900200-174901000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr1:174900200-174901400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
24 chr1:174900200-174901400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:174900200-174901600 Enhancers Cortex derived primary cultured neurospheres brain
26 chr1:174900200-174901600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:174900400-174901000 Enhancers HMEC breast
28 chr1:174900400-174901000 Enhancers NHEK skin
29 chr1:174900400-174901200 Enhancers Fetal Intestine Small intestine
30 chr1:174900400-174902600 Enhancers Brain Substantia Nigra brain
31 chr1:174900600-174901000 Enhancers ES-I3 Cell Line embryonic stem cell
32 chr1:174900600-174901000 Enhancers Pancreatic Islets Pancreatic Islet
33 chr1:174900600-174901800 Enhancers Fetal Intestine Large intestine
34 chr1:174900800-174901400 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr1:174900800-174901600 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr1:174900800-174902000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr1:174900800-174902000 Weak transcription Brain Anterior Caudate brain
38 chr1:174900800-174902000 Weak transcription Brain Cingulate Gyrus brain
39 chr1:174900800-174904600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr1:174900800-174907600 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr1:174900800-174907600 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr1:174900800-174911000 Weak transcription Brain Angular Gyrus brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015