Variant report

Variant	rs191051187
Chromosome Location	chr4:74700736-74700737
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:74699293..74701017-chr4:74704249..74705826,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1001725	chr4:74354050-74860924	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
2	nsv530126	chr4:74376622-74843892	Bivalent Enhancer Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
3	esv3372361	chr4:74699938-74702436	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv3351705	chr4:74700588-74702986	Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:74695200-74701800	Weak transcription	Monocytes-CD14+_RO01746	blood
2	chr4:74695400-74702000	Weak transcription	Primary monocytes fromperipheralblood	blood
3	chr4:74698800-74701800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr4:74698800-74702000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr4:74698800-74702200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr4:74699000-74702000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr4:74699000-74702000	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr4:74699000-74702000	Weak transcription	NHLF	lung
9	chr4:74699200-74702000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr4:74699200-74702200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr4:74699200-74702200	Weak transcription	NH-A	brain
12	chr4:74699400-74702000	Weak transcription	Primary hematopoietic stem cells	blood
13	chr4:74699400-74702000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
14	chr4:74699400-74702000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr4:74699400-74702000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr4:74699400-74702000	Weak transcription	NHDF-Ad	bronchial
17	chr4:74699400-74702000	Weak transcription	Osteobl	bone
18	chr4:74699400-74702400	Weak transcription	HSMM	muscle
19	chr4:74699600-74702400	Weak transcription	HMEC	breast
20	chr4:74699800-74702000	Weak transcription	Primary neutrophils fromperipheralblood	blood
21	chr4:74699800-74702000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr4:74699800-74702000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr4:74699800-74702200	Weak transcription	NHEK	skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links