Variant report

Variant	rs191065599
Chromosome Location	chr14:69070007-69070008
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69068555..69070348-chr14:69070905..69073728,2	K562	blood:
2	chr14:69069857..69071530-chr14:69072196..69073805,2	MCF-7	breast:
3	chr14:69067505..69070348-chr14:69070905..69074097,3	K562	blood:
4	chr14:69065107..69068379-chr14:69069760..69071455,4	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1795754	chr14:69017623-69079110	Enhancers Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv1832715	chr14:69017623-69079110	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv902069	chr14:69068384-69077457	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv516614	chr14:69069594-69077457	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:53 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69061200-69078000	Weak transcription	Fetal Heart	heart
2	chr14:69061800-69070400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr14:69062200-69073800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr14:69064400-69070800	Enhancers	Fetal Intestine Large	intestine
5	chr14:69066000-69070600	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr14:69066000-69070600	Enhancers	Fetal Intestine Small	intestine
7	chr14:69066000-69071200	Weak transcription	Esophagus	oesophagus
8	chr14:69066000-69073800	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr14:69066200-69070200	Weak transcription	HUES64 Cell Line	embryonic stem cell
10	chr14:69066200-69070400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr14:69066200-69070400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr14:69066400-69072600	Weak transcription	Stomach Smooth Muscle	stomach
13	chr14:69066400-69073800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr14:69066600-69070200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr14:69066600-69070400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr14:69066600-69070800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr14:69066800-69070400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr14:69066800-69072200	Weak transcription	Brain Substantia Nigra	brain
19	chr14:69066800-69072200	Weak transcription	Colon Smooth Muscle	Colon
20	chr14:69067000-69072800	Weak transcription	Brain Cingulate Gyrus	brain
21	chr14:69067000-69074000	Weak transcription	Spleen	Spleen
22	chr14:69067200-69070200	Weak transcription	Fetal Thymus	thymus
23	chr14:69067200-69072400	Weak transcription	Rectal Mucosa Donor 31	rectum
24	chr14:69067200-69072600	Weak transcription	Colonic Mucosa	Colon
25	chr14:69067200-69072600	Weak transcription	Left Ventricle	heart
26	chr14:69067200-69072800	Weak transcription	Duodenum Smooth Muscle	Duodenum
27	chr14:69067200-69072800	Weak transcription	Rectal Mucosa Donor 29	rectum
28	chr14:69067200-69073000	Weak transcription	Skeletal Muscle Male	skeletal muscle
29	chr14:69067200-69073400	Weak transcription	Fetal Lung	lung
30	chr14:69067200-69073400	Weak transcription	Right Ventricle	heart
31	chr14:69067200-69073400	Weak transcription	Stomach Mucosa	stomach
32	chr14:69067200-69073800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr14:69067200-69074000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
34	chr14:69067400-69070400	Weak transcription	Fetal Muscle Trunk	muscle
35	chr14:69067400-69073800	Weak transcription	Sigmoid Colon	Sigmoid Colon
36	chr14:69067600-69070200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
37	chr14:69067600-69073000	Weak transcription	Right Atrium	heart
38	chr14:69067600-69074400	Weak transcription	Small Intestine	intestine
39	chr14:69067800-69073400	Weak transcription	Fetal Brain Female	brain
40	chr14:69068000-69070600	Weak transcription	Fetal Stomach	stomach
41	chr14:69068200-69073600	Weak transcription	Brain Hippocampus Middle	brain
42	chr14:69068200-69073800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr14:69068800-69073600	Weak transcription	Duodenum Mucosa	Duodenum
44	chr14:69069000-69070200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
45	chr14:69069000-69072600	Weak transcription	Pancreas	Pancrea
46	chr14:69069200-69072400	Weak transcription	Gastric	stomach
47	chr14:69069600-69070400	Enhancers	Monocytes-CD14+_RO01746	blood
48	chr14:69069600-69080000	Enhancers	Fetal Muscle Leg	muscle
49	chr14:69069800-69070400	Enhancers	Primary monocytes fromperipheralblood	blood
50	chr14:69069800-69071200	Enhancers	Adipose Nuclei	Adipose

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links