Variant report

Variant	rs191098510
Chromosome Location	chr4:26887371-26887372
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv470021	chr4:26721578-27067027	Active TSS Strong transcription Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv1001306	chr4:26821511-26955344	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	nsv461312	chr4:26844674-27078376	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	nsv593872	chr4:26844674-27078376	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
5	nsv1000568	chr4:26886920-27049554	Strong transcription Weak transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	esv2334135	chr4:26887262-26887668	Active TSS Weak transcription Flanking Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26875600-26904600	Weak transcription	Brain Anterior Caudate	brain
2	chr4:26875800-26888200	Weak transcription	Adipose Nuclei	Adipose
3	chr4:26880600-26902400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr4:26880600-26921600	Weak transcription	Fetal Muscle Trunk	muscle
5	chr4:26881800-26896200	Weak transcription	HMEC	breast
6	chr4:26882000-26887800	Weak transcription	Stomach Mucosa	stomach
7	chr4:26882000-26897000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr4:26882200-26889000	Weak transcription	K562	blood
9	chr4:26883400-26892800	Enhancers	Breast Myoepithelial Primary Cells	Breast
10	chr4:26884600-26888000	Weak transcription	Spleen	Spleen
11	chr4:26885000-26887600	Enhancers	Primary hematopoietic stem cells	blood
12	chr4:26885000-26887600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr4:26885200-26888600	Flanking Active TSS	Primary B cells from cord blood	blood
14	chr4:26885400-26887400	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
15	chr4:26885400-26887400	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
16	chr4:26885400-26889200	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
17	chr4:26885400-26889200	Flanking Active TSS	Dnd41	blood
18	chr4:26885600-26887400	Flanking Active TSS	Primary T cells from cord blood	blood
19	chr4:26885600-26887400	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
20	chr4:26885600-26887400	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
21	chr4:26885600-26887400	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
22	chr4:26885600-26887400	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
23	chr4:26885600-26887600	Enhancers	Rectal Mucosa Donor 31	rectum
24	chr4:26885600-26887800	Enhancers	Primary monocytes fromperipheralblood	blood
25	chr4:26885800-26890800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
26	chr4:26885800-26903600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
27	chr4:26886000-26887600	Weak transcription	Fetal Thymus	thymus
28	chr4:26886000-26888000	Active TSS	Primary T cells fromperipheralblood	blood
29	chr4:26886000-26894400	Weak transcription	Skeletal Muscle Female	skeletal muscle
30	chr4:26886000-26896200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr4:26886200-26888200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr4:26886400-26887600	Enhancers	Primary hematopoietic stem cells short term culture	blood
33	chr4:26886400-26887800	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
34	chr4:26886400-26888000	Weak transcription	Rectal Smooth Muscle	rectum
35	chr4:26886400-26888200	Weak transcription	Sigmoid Colon	Sigmoid Colon
36	chr4:26886400-26890600	Weak transcription	Cortex derived primary cultured neurospheres	brain
37	chr4:26886600-26887400	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
38	chr4:26886600-26887400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
39	chr4:26886600-26887600	Enhancers	Primary T helper cells fromperipheralblood	blood
40	chr4:26886600-26887800	Weak transcription	HUES48 Cell Line	embryonic stem cell
41	chr4:26886600-26887800	Enhancers	Primary B cells from peripheral blood	blood
42	chr4:26886600-26888000	Weak transcription	Small Intestine	intestine
43	chr4:26886600-26888000	Weak transcription	Thymus	Thymus
44	chr4:26886600-26888400	Weak transcription	Duodenum Smooth Muscle	Duodenum
45	chr4:26886600-26899400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
46	chr4:26886600-26921600	Weak transcription	Fetal Muscle Leg	muscle
47	chr4:26886800-26887600	Enhancers	Primary neutrophils fromperipheralblood	blood
48	chr4:26886800-26887600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr4:26887000-26887400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr4:26887000-26887600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood

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