Variant report

Variant	rs191249404
Chromosome Location	chr15:40823098-40823099
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34145	chr15:40549617-40889824	Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
2	nsv832984	chr15:40794391-40998535	Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
3	esv3311729	chr15:40821723-40823701	Weak transcription Enhancers	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv3311731	chr15:40821901-40823584	Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:40805200-40828200	Weak transcription	Placenta	Placenta
2	chr15:40805200-40833000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr15:40812400-40828600	Weak transcription	Primary T cells from cord blood	blood
4	chr15:40812400-40828600	Weak transcription	Right Ventricle	heart
5	chr15:40812400-40828800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr15:40812400-40828800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
7	chr15:40812400-40829000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
8	chr15:40812400-40829000	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr15:40812400-40831000	Weak transcription	Thymus	Thymus
10	chr15:40812400-40837800	Weak transcription	Lung	lung
11	chr15:40812600-40826000	Weak transcription	Adipose Nuclei	Adipose
12	chr15:40812600-40826400	Weak transcription	Primary B cells from peripheral blood	blood
13	chr15:40812600-40827000	Weak transcription	Spleen	Spleen
14	chr15:40812600-40831400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr15:40812600-40840600	Weak transcription	Hela-S3	cervix
16	chr15:40816600-40826200	Weak transcription	GM12878-XiMat	blood
17	chr15:40816800-40835000	Weak transcription	Rectal Mucosa Donor 31	rectum
18	chr15:40816800-40845600	Weak transcription	Ovary	ovary
19	chr15:40818200-40828000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
20	chr15:40818400-40828200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr15:40819200-40831200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr15:40819400-40828000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr15:40819400-40830200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr15:40819400-40831200	Weak transcription	Gastric	stomach
25	chr15:40819600-40845000	Weak transcription	Pancreas	Pancrea
26	chr15:40820800-40833800	Weak transcription	K562	blood
27	chr15:40821000-40826800	Weak transcription	Primary B cells from cord blood	blood
28	chr15:40821200-40828800	Weak transcription	Fetal Intestine Small	intestine
29	chr15:40821400-40827800	Weak transcription	Fetal Stomach	stomach
30	chr15:40821400-40836800	Weak transcription	Rectal Mucosa Donor 29	rectum
31	chr15:40821400-40848000	Weak transcription	Brain Anterior Caudate	brain
32	chr15:40821800-40826600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr15:40821800-40840400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
34	chr15:40821800-40856400	Weak transcription	Colon Smooth Muscle	Colon
35	chr15:40822600-40831400	Weak transcription	Aorta	Aorta
36	chr15:40822600-40856400	Weak transcription	Small Intestine	intestine
37	chr15:40822800-40831200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood

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