Variant report

Variant	rs191491608
Chromosome Location	chr16:73076267-73076268
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:72963587..72965845-chr16:73075815..73078142,3	MCF-7	breast:
2	chr16:73040434..73043104-chr16:73074048..73076727,2	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv906898	chr16:73017684-73128146	Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
2	nsv827730	chr16:73066699-73115642	Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
3	nsv827732	chr16:73069343-73116594	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
4	nsv827733	chr16:73075114-73103721	Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:77 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:73055200-73076400	Weak transcription	Brain Angular Gyrus	brain
2	chr16:73059400-73076400	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr16:73067000-73079200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr16:73067200-73078400	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr16:73067800-73081400	Weak transcription	Small Intestine	intestine
6	chr16:73068000-73077400	Weak transcription	NHDF-Ad	bronchial
7	chr16:73068400-73078000	Weak transcription	Hela-S3	cervix
8	chr16:73069400-73076800	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr16:73070000-73076400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
10	chr16:73070400-73080400	Weak transcription	Rectal Mucosa Donor 29	rectum
11	chr16:73070600-73076800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr16:73070600-73077000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr16:73070800-73076400	Weak transcription	Brain Substantia Nigra	brain
14	chr16:73071000-73079800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr16:73071200-73081200	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
16	chr16:73071600-73076600	Weak transcription	Right Ventricle	heart
17	chr16:73071600-73081200	Weak transcription	Esophagus	oesophagus
18	chr16:73072000-73077800	Enhancers	Skeletal Muscle Female	skeletal muscle
19	chr16:73072200-73076400	Weak transcription	Muscle Satellite Cultured Cells	--
20	chr16:73072200-73076400	Weak transcription	HSMM	muscle
21	chr16:73072200-73077400	Weak transcription	NH-A	brain
22	chr16:73072200-73080000	Weak transcription	Stomach Mucosa	stomach
23	chr16:73072400-73076400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
24	chr16:73072400-73076400	Weak transcription	Left Ventricle	heart
25	chr16:73072400-73076400	Weak transcription	Right Atrium	heart
26	chr16:73072400-73076800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
27	chr16:73072400-73077000	Weak transcription	NHLF	lung
28	chr16:73072400-73078200	Weak transcription	Gastric	stomach
29	chr16:73072400-73080000	Weak transcription	Primary hematopoietic stem cells	blood
30	chr16:73072400-73080800	Weak transcription	Spleen	Spleen
31	chr16:73072600-73077000	Weak transcription	Fetal Heart	heart
32	chr16:73072600-73077600	Weak transcription	Liver	Liver
33	chr16:73072600-73077600	Weak transcription	Fetal Intestine Large	intestine
34	chr16:73072600-73080200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
35	chr16:73074200-73077600	Weak transcription	A549	lung
36	chr16:73074200-73079000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
37	chr16:73074400-73076400	Weak transcription	Fetal Muscle Trunk	muscle
38	chr16:73074400-73076400	Enhancers	Fetal Stomach	stomach
39	chr16:73074400-73076400	Weak transcription	Lung	lung
40	chr16:73074400-73076600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr16:73074400-73076600	Weak transcription	Brain Cingulate Gyrus	brain
42	chr16:73074400-73076800	Weak transcription	Pancreas	Pancrea
43	chr16:73074400-73077400	Weak transcription	Fetal Intestine Small	intestine
44	chr16:73074400-73078000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr16:73074400-73079000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chr16:73074600-73076600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
47	chr16:73074600-73077000	Weak transcription	Brain Germinal Matrix	brain
48	chr16:73074600-73078600	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
49	chr16:73074800-73076400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr16:73074800-73076600	Genic enhancers	HepG2	liver

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