Variant report

Variant	rs191546981
Chromosome Location	chr4:141849267-141849268
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv880167	chr4:141616979-142092124	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv830090	chr4:141770494-141947764	Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv830091	chr4:141796603-141980546	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv880168	chr4:141826780-141900370	Weak transcription Strong transcription Enhancers Bivalent Enhancer Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv3345686	chr4:141848832-141849318	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:141816200-141851400	Weak transcription	Brain Anterior Caudate	brain
2	chr4:141823200-141855800	Weak transcription	Osteobl	bone
3	chr4:141832200-141855200	Weak transcription	Duodenum Smooth Muscle	Duodenum
4	chr4:141842800-141852200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr4:141843200-141853400	Weak transcription	Fetal Brain Female	brain
6	chr4:141845600-141850000	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr4:141846400-141855200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr4:141846600-141849600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr4:141846600-141855600	Weak transcription	Fetal Brain Male	brain
10	chr4:141846800-141849400	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr4:141846800-141853200	Weak transcription	Spleen	Spleen
12	chr4:141847000-141850200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr4:141847000-141851600	Weak transcription	Skeletal Muscle Male	skeletal muscle
14	chr4:141847200-141850000	Weak transcription	Adipose Nuclei	Adipose
15	chr4:141847200-141851000	Weak transcription	Stomach Smooth Muscle	stomach
16	chr4:141847200-141855200	Weak transcription	Fetal Muscle Trunk	muscle
17	chr4:141847200-141855200	Weak transcription	Ovary	ovary
18	chr4:141847200-141855800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
19	chr4:141847400-141850200	Weak transcription	Right Ventricle	heart
20	chr4:141847400-141851200	Weak transcription	Fetal Stomach	stomach
21	chr4:141847400-141855200	Weak transcription	Fetal Muscle Leg	muscle
22	chr4:141847400-141855200	Weak transcription	Skeletal Muscle Female	skeletal muscle
23	chr4:141848000-141850200	Weak transcription	Left Ventricle	heart
24	chr4:141848000-141851400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
25	chr4:141848200-141850200	Weak transcription	Psoas Muscle	Psoas
26	chr4:141848200-141851400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
27	chr4:141848200-141856400	Weak transcription	NH-A	brain
28	chr4:141848200-141860600	Weak transcription	Aorta	Aorta
29	chr4:141848400-141850000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr4:141848400-141850000	Weak transcription	Colon Smooth Muscle	Colon
31	chr4:141848400-141851400	Weak transcription	Fetal Heart	heart
32	chr4:141848600-141851600	Weak transcription	Rectal Smooth Muscle	rectum

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