Variant report

Variant	rs191884524
Chromosome Location	chr18:45662127-45662128
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr18:45610278..45611790-chr18:45660940..45662780,2	MCF-7	breast:
2	chr18:45658580..45662145-chr18:45664603..45667810,4	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv909616	chr18:45467806-45844500	Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	esv3337566	chr18:45661104-45665102	Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:64 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:45660200-45662200	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr18:45660400-45662200	Weak transcription	Pancreas	Pancrea
3	chr18:45660400-45662600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr18:45660400-45662600	Enhancers	Dnd41	blood
5	chr18:45660800-45665000	Active TSS	Rectal Smooth Muscle	rectum
6	chr18:45661200-45662200	Weak transcription	HMEC	breast
7	chr18:45661400-45662200	Flanking Bivalent TSS/Enh	Rectal Mucosa Donor 29	rectum
8	chr18:45661400-45663800	Active TSS	Esophagus	oesophagus
9	chr18:45661600-45662200	Weak transcription	Spleen	Spleen
10	chr18:45661800-45662200	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr18:45661800-45662200	Bivalent Enhancer	Adipose Nuclei	Adipose
12	chr18:45661800-45662200	Bivalent Enhancer	Fetal Intestine Large	intestine
13	chr18:45661800-45662200	Bivalent Enhancer	Fetal Intestine Small	intestine
14	chr18:45661800-45662200	Bivalent Enhancer	Fetal Muscle Leg	muscle
15	chr18:45661800-45662200	Enhancers	Skeletal Muscle Female	skeletal muscle
16	chr18:45661800-45662400	Flanking Active TSS	Hela-S3	cervix
17	chr18:45661800-45662600	Enhancers	Lung	lung
18	chr18:45661800-45662800	Bivalent Enhancer	Fetal Brain Male	brain
19	chr18:45661800-45664000	Active TSS	Colonic Mucosa	Colon
20	chr18:45662000-45662200	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
21	chr18:45662000-45662200	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr18:45662000-45662200	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr18:45662000-45662200	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr18:45662000-45662200	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr18:45662000-45662200	Enhancers	Liver	Liver
26	chr18:45662000-45662200	Bivalent Enhancer	Brain Hippocampus Middle	brain
27	chr18:45662000-45662200	Enhancers	Brain Substantia Nigra	brain
28	chr18:45662000-45662200	Flanking Bivalent TSS/Enh	Colon Smooth Muscle	Colon
29	chr18:45662000-45662200	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
30	chr18:45662000-45662200	Enhancers	Ovary	ovary
31	chr18:45662000-45662200	Enhancers	Psoas Muscle	Psoas
32	chr18:45662000-45662200	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
33	chr18:45662000-45662200	Flanking Active TSS	Stomach Mucosa	stomach
34	chr18:45662000-45662200	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
35	chr18:45662000-45662400	Flanking Bivalent TSS/Enh	ES-UCSF4 Cell Line	embryonic stem cell
36	chr18:45662000-45662400	Bivalent/Poised TSS	Ganglion Eminence derived primary cultured neurospheres	brain
37	chr18:45662000-45662400	Enhancers	Brain Inferior Temporal Lobe	brain
38	chr18:45662000-45662400	Active TSS	Right Ventricle	heart
39	chr18:45662000-45662600	Bivalent/Poised TSS	Fetal Lung	lung
40	chr18:45662000-45662600	Active TSS	Sigmoid Colon	Sigmoid Colon
41	chr18:45662000-45663000	Flanking Bivalent TSS/Enh	Fetal Stomach	stomach
42	chr18:45662000-45663200	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
43	chr18:45662000-45663200	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
44	chr18:45662000-45663200	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
45	chr18:45662000-45663200	Flanking Active TSS	Placenta	Placenta
46	chr18:45662000-45663400	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
47	chr18:45662000-45663400	Bivalent/Poised TSS	Brain Dorsolateral Prefrontal Cortex	brain
48	chr18:45662000-45663400	Active TSS	Duodenum Mucosa	Duodenum
49	chr18:45662000-45663400	Bivalent/Poised TSS	Small Intestine	intestine
50	chr18:45662000-45663600	Flanking Bivalent TSS/Enh	Brain Germinal Matrix	brain

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