Variant report

(count:23 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chrX:73564360-73564510	HRPEpiC	eye:	n/a	n/a
2	CTCF	chrX:73564313-73564468	GM12878	blood:	n/a	n/a
3	CTCF	chrX:73564322-73564415	GM10266	blood:	n/a	n/a
4	CTCF	chrX:73564240-73564390	GM12875	blood:	n/a	n/a
5	SMC3	chrX:73563627-73564590	SK-N-SH	brain:	n/a	n/a
6	CTCF	chrX:73564260-73564410	AG04449	skin:	n/a	n/a
7	CTCF	chrX:73564240-73564390	NHDF-neo	bronchial:	n/a	n/a
8	CTCF	chrX:73564292-73564405	GM20000	blood:	n/a	n/a
9	RAD21	chrX:73563621-73564473	SK-N-SH	brain:	n/a	n/a
10	CTCF	chrX:73564260-73564410	SAEC	small airway:	n/a	n/a
11	CTCF	chrX:73564346-73564415	GM19240	blood:	n/a	n/a
12	CTCF	chrX:73563180-73564565	SK-N-SH	brain:	n/a	n/a
13	CTCF	chrX:73564300-73564450	HEK293	kidney:	n/a	n/a
14	CTCF	chrX:73564360-73564510	GM12866	blood:	n/a	n/a
15	NFIC	chrX:73563788-73564389	SK-N-SH	brain:	n/a	n/a
16	CTCF	chrX:73564240-73564390	BJ	skin:	n/a	n/a
17	CTCF	chrX:73564293-73564394	GM13976	blood:	n/a	n/a
18	CTCF	chrX:73564327-73564415	GM19238	blood:	n/a	n/a
19	CTCF	chrX:73563631-73564447	A549	lung:	n/a	n/a
20	NFIC	chrX:73563716-73564373	ECC-1	luminal epithelium:	n/a	n/a
21	CTCF	chrX:73563822-73564452	GM12878	blood:	n/a	n/a
22	CTCF	chrX:73564360-73564510	HEK293	kidney:	n/a	n/a
23	CTCF	chrX:73564364-73564466	Lung_OC	lung:	n/a	n/a

No data

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chrX:73075052..73075793-chrX:73563582..73564389,3	MCF-7	breast:
2	chrX:73564172..73566184-chrX:73572530..73575496,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000226515	TF binding region

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3364045	chrX:72896383-73699363	Strong transcription Weak transcription Enhancers Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	301 gene(s)	inside rSNPs	diseases
2	nsv916758	chrX:73546406-74420929	Active TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
3	nsv520605	chrX:73549327-73569476	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv2830082	chrX:73564051-73635867	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:73562600-73564600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chrX:73562800-73564600	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chrX:73562800-73564600	Enhancers	Primary monocytes fromperipheralblood	blood
4	chrX:73562800-73564600	Enhancers	Hela-S3	cervix
5	chrX:73563200-73564400	Enhancers	iPS-20b Cell Line	embryonic stem cell
6	chrX:73563200-73564600	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chrX:73563200-73564600	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chrX:73563200-73564600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chrX:73563600-73564600	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chrX:73563600-73568800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chrX:73563800-73564400	Enhancers	Primary B cells from peripheral blood	blood
12	chrX:73563800-73564400	Enhancers	A549	lung
13	chrX:73564000-73564400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chrX:73564000-73565400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chrX:73564000-73565600	Weak transcription	Primary hematopoietic stem cells	blood
16	chrX:73564200-73564400	Enhancers	ES-WA7 Cell Line	embryonic stem cell

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