Variant report

Variant rs192045699
Chromosome Location chr5:58588941-58588942
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:58574200-58590200 Weak transcription Right Atrium heart
2 chr5:58583600-58589600 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr5:58583600-58592400 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr5:58583600-58592600 Weak transcription Psoas Muscle Psoas
5 chr5:58583600-58596400 Weak transcription Esophagus oesophagus
6 chr5:58583800-58591200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr5:58584000-58589000 Weak transcription Colon Smooth Muscle Colon
8 chr5:58584000-58589400 Weak transcription Rectal Smooth Muscle rectum
9 chr5:58584000-58591800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr5:58584000-58596400 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr5:58584800-58592400 Weak transcription Fetal Intestine Large intestine
12 chr5:58587800-58589800 Enhancers HUVEC blood vessel
13 chr5:58587800-58592800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr5:58588000-58592400 Weak transcription Brain Hippocampus Middle brain
15 chr5:58588200-58591200 Weak transcription Fetal Heart heart
16 chr5:58588400-58590200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr5:58588400-58590200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr5:58588400-58591400 Genic enhancers A549 lung
19 chr5:58588600-58589200 Enhancers NHEK skin
20 chr5:58588600-58589800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr5:58588600-58590000 Enhancers HMEC breast
22 chr5:58588600-58590600 Enhancers Skeletal Muscle Female skeletal muscle
23 chr5:58588600-58592400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr5:58588600-58592400 Enhancers Pancreatic Islets Pancreatic Islet
25 chr5:58588800-58592200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr5:58588800-58592400 Enhancers Hela-S3 cervix

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