The 2.0 version of rSNPBase

Variant report

Variant rs192160990
Chromosome Location chr11:45993717-45993718
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:45952400-45996200 Weak transcription Stomach Mucosa stomach
2 chr11:45957200-46004400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr11:45957200-46004400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr11:45967600-46004600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr11:45975200-45999200 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr11:45980200-45995600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr11:45981400-45995000 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr11:45982200-46002200 Strong transcription Primary neutrophils fromperipheralblood blood
9 chr11:45983000-45994000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr11:45983000-46002200 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr11:45984000-45995000 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr11:45985000-46002200 Strong transcription Primary monocytes fromperipheralblood blood
13 chr11:45985200-45993800 Strong transcription Primary T cells fromperipheralblood blood
14 chr11:45985200-45994000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr11:45985400-46002600 Strong transcription Primary B cells from cord blood blood
16 chr11:45985600-45993800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr11:45985800-45997800 Strong transcription Primary T cells from cord blood blood
18 chr11:45985800-46003800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr11:45987000-45993800 Strong transcription Liver Liver
20 chr11:45987000-46004000 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr11:45987200-46000800 Weak transcription NHEK skin
22 chr11:45987600-46004600 Weak transcription Gastric stomach
23 chr11:45988400-46004400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr11:45989400-45994800 Weak transcription Fetal Heart heart
25 chr11:45989400-46000000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr11:45989800-46000000 Weak transcription Muscle Satellite Cultured Cells --
27 chr11:45990000-46000000 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr11:45990200-45995800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr11:45990400-46000600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr11:45990400-46001600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr11:45990800-46000000 Weak transcription NH-A brain
32 chr11:45991000-46004400 Weak transcription H9 Cell Line embryonic stem cell
33 chr11:45991000-46004400 Weak transcription A549 lung
34 chr11:45991200-45995400 Strong transcription K562 blood
35 chr11:45991400-45995600 Weak transcription Colonic Mucosa Colon
36 chr11:45991400-45997600 Weak transcription Fetal Intestine Small intestine
37 chr11:45991800-46003600 Weak transcription Brain Germinal Matrix brain
38 chr11:45992200-46004400 Weak transcription HMEC breast
39 chr11:45992400-45994200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
40 chr11:45992400-45996200 Weak transcription NHDF-Ad bronchial
41 chr11:45992600-46000000 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr11:45992600-46003600 Weak transcription Fetal Brain Male brain
43 chr11:45992800-45994800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr11:45992800-45996400 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr11:45992800-45997200 Weak transcription HSMMtube muscle
46 chr11:45992800-45997400 Weak transcription Hela-S3 cervix
47 chr11:45992800-45998400 Weak transcription GM12878-XiMat blood
48 chr11:45992800-45999400 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr11:45992800-45999800 Weak transcription HepG2 liver
50 chr11:45992800-46000000 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015