The 2.0 version of rSNPBase

Variant report

Variant rs1921953
Chromosome Location chr12:106721012-106721013
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:106700600-106736000 Weak transcription Stomach Mucosa stomach
2 chr12:106703000-106722800 Weak transcription Fetal Brain Male brain
3 chr12:106704200-106729400 Weak transcription NHLF lung
4 chr12:106704200-106729800 Weak transcription Muscle Satellite Cultured Cells --
5 chr12:106704600-106724400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr12:106704800-106726800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
7 chr12:106704800-106738800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr12:106705200-106743400 Strong transcription Primary T cells fromperipheralblood blood
9 chr12:106705400-106731600 Strong transcription Primary T regulatory cells fromperipheralblood blood
10 chr12:106705400-106743200 Strong transcription Primary T helper cells fromperipheralblood blood
11 chr12:106705800-106725400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr12:106706000-106727800 Strong transcription Placenta Placenta
13 chr12:106707800-106721800 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr12:106707800-106726400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
15 chr12:106707800-106738800 Strong transcription Primary T helper cells PMA-I stimulated --
16 chr12:106707800-106738800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
17 chr12:106708000-106721400 Strong transcription Duodenum Smooth Muscle Duodenum
18 chr12:106708000-106721600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr12:106708000-106721600 Strong transcription Stomach Smooth Muscle stomach
20 chr12:106708000-106723400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr12:106708000-106726800 Strong transcription Fetal Intestine Large intestine
22 chr12:106708000-106728200 Strong transcription Primary T helper naive cells fromperipheralblood blood
23 chr12:106708000-106740600 Strong transcription Primary T cells from cord blood blood
24 chr12:106708000-106741000 Strong transcription Primary B cells from peripheral blood blood
25 chr12:106708200-106721200 Strong transcription Ovary ovary
26 chr12:106708200-106721200 Strong transcription Sigmoid Colon Sigmoid Colon
27 chr12:106708200-106721400 Strong transcription Fetal Adrenal Gland Adrenal Gland
28 chr12:106708400-106721200 Strong transcription Primary B cells from cord blood blood
29 chr12:106708400-106723400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr12:106708400-106728000 Strong transcription Thymus Thymus
31 chr12:106708600-106727000 Strong transcription Primary hematopoietic stem cells blood
32 chr12:106709000-106721400 Strong transcription Rectal Mucosa Donor 29 rectum
33 chr12:106710000-106729800 Weak transcription Hela-S3 cervix
34 chr12:106710200-106721400 Strong transcription Primary monocytes fromperipheralblood blood
35 chr12:106710400-106725400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr12:106712000-106724200 Strong transcription Spleen Spleen
37 chr12:106712000-106732600 Strong transcription Breast Myoepithelial Primary Cells Breast
38 chr12:106713400-106741600 Weak transcription Small Intestine intestine
39 chr12:106716200-106725400 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr12:106716400-106722400 Strong transcription Primary neutrophils fromperipheralblood blood
41 chr12:106716400-106722600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr12:106716400-106735400 Weak transcription Right Atrium heart
43 chr12:106716600-106729800 Weak transcription HepG2 liver
44 chr12:106716800-106722600 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr12:106716800-106735400 Weak transcription Esophagus oesophagus
46 chr12:106716800-106736000 Weak transcription Gastric stomach
47 chr12:106717000-106729200 Weak transcription Placenta Amnion Placenta Amnion
48 chr12:106717000-106735600 Weak transcription HSMMtube muscle
49 chr12:106717600-106721200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr12:106717800-106729800 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015