Variant report

Variant	rs192275232
Chromosome Location	chr3:56467630-56467631
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3383044	chr3:56466497-56483664	Strong transcription Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3347557	chr3:56466500-56619322	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56447400-56469200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr3:56450000-56467800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr3:56450000-56469800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr3:56456400-56479600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr3:56456800-56468000	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr3:56456800-56468400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr3:56457600-56473400	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr3:56458000-56474800	Weak transcription	Fetal Heart	heart
9	chr3:56458600-56468400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr3:56465000-56468800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr3:56465600-56468000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr3:56465600-56468400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr3:56466200-56468200	Weak transcription	Brain Cingulate Gyrus	brain
14	chr3:56466400-56469000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr3:56466400-56471600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
16	chr3:56466600-56468800	Strong transcription	Brain Germinal Matrix	brain
17	chr3:56467000-56469000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
18	chr3:56467200-56473000	Weak transcription	HUVEC	blood vessel
19	chr3:56467400-56469000	Strong transcription	H1 Cell Line	embryonic stem cell
20	chr3:56467400-56469000	Strong transcription	HUES6 Cell Line	embryonic stem cell
21	chr3:56467400-56469000	Strong transcription	HUES64 Cell Line	embryonic stem cell
22	chr3:56467400-56469000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
23	chr3:56467400-56469000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr3:56467400-56469000	Strong transcription	Fetal Brain Female	brain
25	chr3:56467600-56468800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr3:56467600-56469200	Strong transcription	HUES48 Cell Line	embryonic stem cell
27	chr3:56467600-56469600	Weak transcription	Pancreas	Pancrea
28	chr3:56467600-56470400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chr3:56467600-56470600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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