Variant report

Variant	rs192326542
Chromosome Location	chr11:74023197-74023198
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	E2F6	chr11:74022328-74023269	K562	blood:	n/a	chr11:74022708-74022719
2	MAX	chr11:74022404-74023200	A549	lung:	n/a	n/a
3	MAX	chr11:74021742-74023285	A549	lung:	n/a	n/a
4	MAX	chr11:74022376-74023200	HCT-116	colon:	n/a	n/a
5	MAX	chr11:74022458-74023204	HCT-116	colon:	n/a	n/a
6	E2F6	chr11:74022449-74023378	H1-hESC	embryonic stem cell:	n/a	chr11:74022708-74022719
7	E2F6	chr11:74022487-74023326	H1-hESC	embryonic stem cell:	n/a	chr11:74022708-74022719
8	E2F6	chr11:74022365-74023218	A549	lung:	n/a	chr11:74022708-74022719
9	MAX	chr11:74022413-74023234	ECC-1	luminal epithelium:	n/a	n/a

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PPME1-1	chr11:74023164-74023264	ENSG00000246211

Variant related genes	Relation type
P4HA3	TF binding region

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2757451	chr11:73842609-74545888	Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Enhancers Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
2	esv2759837	chr11:73842609-74557597	Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
3	esv34979	chr11:73878688-74533452	Enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	85 gene(s)	inside rSNPs	diseases
4	esv2758277	chr11:73887567-74557597	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	85 gene(s)	inside rSNPs	diseases
5	nsv825994	chr11:73936667-74534455	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	83 gene(s)	inside rSNPs	diseases
6	esv3442682	chr11:74019804-74024402	Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
7	esv3462630	chr11:74022904-74029002	Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:53 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:74021800-74023200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr11:74021800-74023200	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr11:74022000-74023200	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
4	chr11:74022000-74023200	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
5	chr11:74022200-74023200	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
6	chr11:74022200-74023200	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
7	chr11:74022200-74023200	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
8	chr11:74022200-74023200	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
9	chr11:74022200-74023200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
10	chr11:74022200-74023200	Flanking Active TSS	Adipose Nuclei	Adipose
11	chr11:74022400-74023200	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
12	chr11:74022400-74023200	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
13	chr11:74022400-74023200	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr11:74022400-74023200	Active TSS	Primary T cells from cord blood	blood
15	chr11:74022400-74023200	Bivalent/Poised TSS	Skeletal Muscle Male	skeletal muscle
16	chr11:74022400-74023200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
17	chr11:74022600-74023200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
18	chr11:74022600-74023200	Enhancers	Primary B cells from cord blood	blood
19	chr11:74022600-74023200	Bivalent Enhancer	Primary hematopoietic stem cells	blood
20	chr11:74022600-74023200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr11:74022600-74023200	Bivalent/Poised TSS	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr11:74022600-74023600	Enhancers	Primary neutrophils fromperipheralblood	blood
23	chr11:74022800-74023200	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
24	chr11:74022800-74023200	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
25	chr11:74022800-74023200	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
26	chr11:74022800-74023200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
27	chr11:74022800-74023200	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr11:74022800-74023200	Flanking Active TSS	Muscle Satellite Cultured Cells	--
29	chr11:74022800-74023200	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr11:74022800-74023200	Flanking Active TSS	Fetal Heart	heart
31	chr11:74022800-74023200	Flanking Active TSS	A549	lung
32	chr11:74022800-74023200	Flanking Active TSS	HUVEC	blood vessel
33	chr11:74023000-74023200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr11:74023000-74023200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr11:74023000-74023200	Flanking Bivalent TSS/Enh	H9 Cell Line	embryonic stem cell
36	chr11:74023000-74023200	Flanking Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
37	chr11:74023000-74023200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr11:74023000-74023200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr11:74023000-74023200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
40	chr11:74023000-74023200	Active TSS	Colonic Mucosa	Colon
41	chr11:74023000-74023200	Enhancers	Colon Smooth Muscle	Colon
42	chr11:74023000-74023200	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
43	chr11:74023000-74023200	Bivalent Enhancer	Fetal Intestine Small	intestine
44	chr11:74023000-74023200	Bivalent Enhancer	Fetal Muscle Leg	muscle
45	chr11:74023000-74023200	Enhancers	Placenta	Placenta
46	chr11:74023000-74023200	Enhancers	Lung	lung
47	chr11:74023000-74023200	Enhancers	Right Ventricle	heart
48	chr11:74023000-74023200	Enhancers	Skeletal Muscle Female	skeletal muscle
49	chr11:74023000-74023200	Enhancers	HMEC	breast
50	chr11:74023000-74023200	Enhancers	NHEK	skin

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