The 2.0 version of rSNPBase

Variant report

Variant rs192345000
Chromosome Location chr11:34219717-34219718
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34203000-34224800 Weak transcription Primary neutrophils fromperipheralblood blood
2 chr11:34203400-34228200 Weak transcription Psoas Muscle Psoas
3 chr11:34207200-34226000 Weak transcription Gastric stomach
4 chr11:34208200-34235200 Weak transcription Adipose Nuclei Adipose
5 chr11:34210600-34224800 Weak transcription Primary T cells from cord blood blood
6 chr11:34210600-34226600 Weak transcription Pancreas Pancrea
7 chr11:34214000-34224400 Weak transcription GM12878-XiMat blood
8 chr11:34214600-34228000 Weak transcription Brain Angular Gyrus brain
9 chr11:34214800-34225200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr11:34215000-34223200 Weak transcription Fetal Lung lung
11 chr11:34215000-34228200 Weak transcription Brain Inferior Temporal Lobe brain
12 chr11:34215000-34228400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr11:34215000-34235800 Weak transcription Brain Anterior Caudate brain
14 chr11:34215200-34220000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr11:34215200-34226400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr11:34215200-34226400 Weak transcription Osteobl bone
17 chr11:34215200-34227400 Weak transcription Brain Substantia Nigra brain
18 chr11:34215200-34228200 Weak transcription Duodenum Mucosa Duodenum
19 chr11:34215600-34224400 Weak transcription NHEK skin
20 chr11:34215600-34225400 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr11:34215600-34228200 Weak transcription Right Atrium heart
22 chr11:34215600-34232600 Weak transcription Fetal Brain Female brain
23 chr11:34215800-34224800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr11:34215800-34225400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr11:34216000-34224600 Weak transcription Hela-S3 cervix
26 chr11:34216000-34225600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr11:34216000-34228200 Weak transcription Brain Cingulate Gyrus brain
28 chr11:34216200-34223600 Weak transcription Right Ventricle heart
29 chr11:34216200-34225400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr11:34216200-34226600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr11:34216600-34228400 Weak transcription Lung lung
32 chr11:34217000-34219800 Strong transcription Fetal Adrenal Gland Adrenal Gland
33 chr11:34217000-34220000 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr11:34217000-34223200 Weak transcription Fetal Muscle Leg muscle
35 chr11:34217000-34225000 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr11:34217000-34225200 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr11:34217200-34220200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr11:34217200-34224600 Weak transcription H1 Cell Line embryonic stem cell
39 chr11:34217200-34224800 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr11:34217200-34224800 Weak transcription NH-A brain
41 chr11:34217200-34225000 Weak transcription ES-WA7 Cell Line embryonic stem cell
42 chr11:34217400-34223800 Weak transcription Fetal Muscle Trunk muscle
43 chr11:34217400-34224800 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr11:34217600-34225000 Weak transcription Aorta Aorta
45 chr11:34218400-34221000 Enhancers Primary Natural Killer cells fromperipheralblood blood
46 chr11:34218800-34220000 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr11:34218800-34222000 Enhancers Fetal Thymus thymus
48 chr11:34218800-34222600 Weak transcription Fetal Stomach stomach
49 chr11:34218800-34223200 Weak transcription Stomach Smooth Muscle stomach
50 chr11:34218800-34223400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015