Variant report

Variant rs192396346
Chromosome Location chr11:85426348-85426349
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:85394000-85427400 Weak transcription Small Intestine intestine
2 chr11:85396800-85429800 Weak transcription Stomach Mucosa stomach
3 chr11:85397200-85438600 Weak transcription Colonic Mucosa Colon
4 chr11:85397600-85428400 Weak transcription Brain Angular Gyrus brain
5 chr11:85397800-85430000 Weak transcription Ovary ovary
6 chr11:85398000-85427600 Weak transcription Brain Substantia Nigra brain
7 chr11:85406200-85429800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr11:85408600-85426600 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr11:85409400-85427200 Weak transcription Fetal Lung lung
10 chr11:85412000-85436800 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr11:85412000-85438000 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr11:85412600-85427000 Weak transcription Fetal Intestine Small intestine
13 chr11:85413600-85427200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr11:85413600-85429600 Weak transcription Fetal Stomach stomach
15 chr11:85413800-85430000 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr11:85417600-85427200 Weak transcription NH-A brain
17 chr11:85417600-85428600 Weak transcription Osteobl bone
18 chr11:85417600-85453000 Weak transcription Gastric stomach
19 chr11:85418400-85436400 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr11:85418600-85427000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr11:85422400-85427800 Weak transcription Brain Hippocampus Middle brain
22 chr11:85422400-85428000 Weak transcription Brain Inferior Temporal Lobe brain
23 chr11:85422400-85430200 Weak transcription Fetal Kidney kidney
24 chr11:85422600-85427000 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr11:85422600-85428600 Weak transcription Brain Cingulate Gyrus brain
26 chr11:85422600-85448600 Weak transcription Fetal Intestine Large intestine
27 chr11:85422800-85448200 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr11:85423000-85429800 Weak transcription Rectal Smooth Muscle rectum
29 chr11:85423600-85430000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr11:85424000-85448600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr11:85424200-85426800 Enhancers A549 lung
32 chr11:85424200-85427800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
33 chr11:85424400-85427000 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr11:85424400-85428400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr11:85424600-85427000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr11:85424600-85429800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr11:85425000-85427200 Weak transcription Fetal Muscle Leg muscle
38 chr11:85425200-85428600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
39 chr11:85425400-85427000 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr11:85425400-85428600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr11:85425600-85426400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr11:85425600-85427000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr11:85425600-85427000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr11:85425600-85427000 Weak transcription HSMMtube muscle
45 chr11:85425600-85427200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr11:85425600-85427200 Weak transcription Fetal Muscle Trunk muscle
47 chr11:85425600-85429600 Weak transcription Duodenum Mucosa Duodenum
48 chr11:85425600-85429800 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr11:85425800-85426600 Enhancers NHDF-Ad bronchial
50 chr11:85425800-85429600 Weak transcription Primary T cells from cord blood blood

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