Variant report

Variant	rs192432433
Chromosome Location	chr13:96673191-96673192
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:96666484..96668467-chr13:96672707..96674381,2	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050430	chr13:96508530-97020734	Weak transcription Strong transcription Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv541883	chr13:96508530-97020734	Enhancers Weak transcription ZNF genes & repeats Active TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
3	nsv1041165	chr13:96522021-96966520	Enhancers Bivalent/Poised TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	nsv1051574	chr13:96550653-96779248	Strong transcription Weak transcription Active TSS ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
5	nsv1040320	chr13:96573646-96790859	Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
6	nsv869471	chr13:96622327-97223956	Weak transcription Strong transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	14 gene(s)	inside rSNPs	diseases
7	esv3406185	chr13:96673001-96676499	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:86 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:96613200-96694200	Weak transcription	A549	lung
2	chr13:96622200-96677200	Weak transcription	NH-A	brain
3	chr13:96657800-96677200	Weak transcription	HSMMtube	muscle
4	chr13:96660200-96682200	Weak transcription	Placenta Amnion	Placenta Amnion
5	chr13:96660400-96678600	Weak transcription	Duodenum Mucosa	Duodenum
6	chr13:96660600-96676600	Weak transcription	Osteobl	bone
7	chr13:96660800-96684800	Weak transcription	Psoas Muscle	Psoas
8	chr13:96663200-96685400	Weak transcription	HMEC	breast
9	chr13:96664000-96677200	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr13:96664200-96677600	Weak transcription	NHDF-Ad	bronchial
11	chr13:96664200-96684800	Weak transcription	NHLF	lung
12	chr13:96668600-96679400	Weak transcription	Fetal Brain Male	brain
13	chr13:96668600-96704400	Weak transcription	Stomach Smooth Muscle	stomach
14	chr13:96668800-96673600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr13:96668800-96685400	Weak transcription	Gastric	stomach
16	chr13:96669000-96683200	Weak transcription	Esophagus	oesophagus
17	chr13:96669000-96685800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr13:96669000-96686200	Weak transcription	NHEK	skin
19	chr13:96669200-96686800	Weak transcription	Right Ventricle	heart
20	chr13:96669200-96694000	Weak transcription	Sigmoid Colon	Sigmoid Colon
21	chr13:96669400-96676600	Weak transcription	Aorta	Aorta
22	chr13:96669400-96677000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
23	chr13:96669400-96677000	Weak transcription	Brain Germinal Matrix	brain
24	chr13:96669400-96677200	Weak transcription	Duodenum Smooth Muscle	Duodenum
25	chr13:96669400-96677200	Weak transcription	Monocytes-CD14+_RO01746	blood
26	chr13:96669400-96680000	Weak transcription	Primary monocytes fromperipheralblood	blood
27	chr13:96669400-96685400	Weak transcription	Fetal Kidney	kidney
28	chr13:96669400-96685600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr13:96669400-96685600	Weak transcription	Fetal Brain Female	brain
30	chr13:96669400-96694000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr13:96669400-96704600	Weak transcription	Brain Anterior Caudate	brain
32	chr13:96669600-96674200	Weak transcription	H9 Cell Line	embryonic stem cell
33	chr13:96669600-96677400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr13:96669600-96686400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
35	chr13:96669600-96686400	Weak transcription	Skeletal Muscle Male	skeletal muscle
36	chr13:96669600-96687000	Weak transcription	Adipose Nuclei	Adipose
37	chr13:96669800-96676800	Weak transcription	Lung	lung
38	chr13:96669800-96676800	Weak transcription	Ovary	ovary
39	chr13:96669800-96677400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr13:96669800-96677400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
41	chr13:96669800-96677600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
42	chr13:96669800-96679600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
43	chr13:96669800-96685600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
44	chr13:96669800-96686200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
45	chr13:96669800-96686400	Weak transcription	Fetal Lung	lung
46	chr13:96670400-96680200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr13:96670400-96685800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
48	chr13:96670800-96674200	Enhancers	Fetal Intestine Large	intestine
49	chr13:96671200-96674800	Weak transcription	Rectal Smooth Muscle	rectum
50	chr13:96671400-96673200	Strong transcription	Hela-S3	cervix

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