The 2.0 version of rSNPBase

Variant report

Variant rs1925341
Chromosome Location chr1:67115084-67115085
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67090400-67155000 Weak transcription Fetal Heart heart
2 chr1:67091200-67128000 Weak transcription NH-A brain
3 chr1:67092000-67117200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr1:67099400-67115600 Weak transcription Fetal Lung lung
5 chr1:67100000-67144400 Weak transcription Left Ventricle heart
6 chr1:67102800-67120200 Weak transcription Brain Germinal Matrix brain
7 chr1:67106200-67143000 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr1:67106800-67115800 Weak transcription Fetal Brain Male brain
9 chr1:67108000-67136200 Weak transcription Fetal Brain Female brain
10 chr1:67109000-67117800 Weak transcription Osteobl bone
11 chr1:67109200-67120200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:67109200-67141800 Weak transcription Muscle Satellite Cultured Cells --
13 chr1:67109600-67134200 Weak transcription Brain Cingulate Gyrus brain
14 chr1:67109600-67155000 Weak transcription Brain Anterior Caudate brain
15 chr1:67110200-67116400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr1:67110200-67118800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr1:67110800-67118400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr1:67110800-67134400 Weak transcription Brain Substantia Nigra brain
19 chr1:67111000-67115200 Weak transcription NHDF-Ad bronchial
20 chr1:67111000-67120400 Weak transcription Brain Angular Gyrus brain
21 chr1:67111000-67135200 Weak transcription Brain Inferior Temporal Lobe brain
22 chr1:67111400-67154800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr1:67111800-67118200 Weak transcription Aorta Aorta
24 chr1:67114000-67115200 Enhancers Fetal Kidney kidney
25 chr1:67114200-67115400 Enhancers Primary monocytes fromperipheralblood blood
26 chr1:67114200-67115400 Enhancers Primary B cells from peripheral blood blood
27 chr1:67114200-67115400 Enhancers Primary hematopoietic stem cells blood
28 chr1:67114200-67115400 Enhancers Primary hematopoietic stem cells short term culture blood
29 chr1:67114200-67116400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr1:67114200-67116400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr1:67114200-67134200 Weak transcription Brain Hippocampus Middle brain
32 chr1:67114200-67142000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr1:67114200-67156400 Weak transcription Stomach Smooth Muscle stomach
34 chr1:67114400-67118200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr1:67114600-67142200 Weak transcription NHLF lung
36 chr1:67114800-67115200 Flanking Active TSS Primary B cells from cord blood blood
37 chr1:67114800-67115200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
38 chr1:67115000-67115200 Flanking Active TSS GM12878-XiMat blood

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Last update: Aug 31, 2015