The 2.0 version of rSNPBase

Variant report

Variant rs192568778
Chromosome Location chr12:46175798-46175799
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:46132000-46205200 Weak transcription HSMM muscle
2 chr12:46149600-46215400 Weak transcription Fetal Kidney kidney
3 chr12:46157400-46199600 Weak transcription HepG2 liver
4 chr12:46164400-46187800 Weak transcription Fetal Thymus thymus
5 chr12:46164400-46193600 Weak transcription Fetal Stomach stomach
6 chr12:46164600-46187800 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr12:46164600-46187800 Weak transcription GM12878-XiMat blood
8 chr12:46164600-46193400 Weak transcription Primary hematopoietic stem cells blood
9 chr12:46164600-46205200 Weak transcription Dnd41 blood
10 chr12:46164600-46230000 Weak transcription Thymus Thymus
11 chr12:46164800-46193200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr12:46165200-46187800 Weak transcription Primary T cells fromperipheralblood blood
13 chr12:46165400-46176800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr12:46166200-46181200 Weak transcription Hela-S3 cervix
15 chr12:46166800-46199800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr12:46167600-46205200 Weak transcription Duodenum Mucosa Duodenum
17 chr12:46168600-46193400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr12:46168800-46181000 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr12:46168800-46193600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr12:46169000-46177000 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr12:46169000-46178400 Weak transcription Gastric stomach
22 chr12:46169000-46181800 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr12:46169000-46182600 Weak transcription NHDF-Ad bronchial
24 chr12:46169000-46187800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr12:46169000-46197600 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr12:46169000-46202400 Weak transcription Aorta Aorta
27 chr12:46169000-46202400 Weak transcription Left Ventricle heart
28 chr12:46169000-46202400 Weak transcription Psoas Muscle Psoas
29 chr12:46169000-46205200 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr12:46169000-46208000 Weak transcription Brain Angular Gyrus brain
31 chr12:46169000-46215400 Weak transcription Fetal Lung lung
32 chr12:46169200-46182800 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr12:46169200-46190000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr12:46170000-46177200 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr12:46170000-46184200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr12:46170200-46176000 Weak transcription H1 Cell Line embryonic stem cell
37 chr12:46170200-46182400 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr12:46170200-46183000 Weak transcription Brain Substantia Nigra brain
39 chr12:46170200-46193600 Weak transcription Fetal Intestine Small intestine
40 chr12:46170400-46182800 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr12:46174000-46182800 Weak transcription A549 lung
42 chr12:46174200-46205000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr12:46175200-46176000 Enhancers iPS-20b Cell Line embryonic stem cell
44 chr12:46175200-46176400 Enhancers iPS-18 Cell Line embryonic stem cell
45 chr12:46175200-46178600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr12:46175200-46181000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr12:46175200-46215400 Weak transcription Primary B cells from cord blood blood
48 chr12:46175400-46175800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr12:46175600-46175800 Enhancers Breast Myoepithelial Primary Cells Breast
50 chr12:46175600-46205200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015