The 2.0 version of rSNPBase

Variant report

Variant rs1926422
Chromosome Location chr10:22839927-22839928
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:22822200-22856000 Weak transcription Small Intestine intestine
2 chr10:22822800-22870200 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr10:22823000-22844600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
4 chr10:22823400-22845200 Strong transcription Primary monocytes fromperipheralblood blood
5 chr10:22823600-22842200 Weak transcription Colon Smooth Muscle Colon
6 chr10:22823800-22845200 Strong transcription Primary T helper cells PMA-I stimulated --
7 chr10:22824000-22844400 Strong transcription Primary B cells from cord blood blood
8 chr10:22824000-22844800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr10:22824000-22853000 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr10:22824200-22840000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
11 chr10:22824400-22845400 Strong transcription Primary T regulatory cells fromperipheralblood blood
12 chr10:22824800-22840800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr10:22825000-22840200 Weak transcription Placenta Amnion Placenta Amnion
14 chr10:22825000-22840600 Strong transcription Primary neutrophils fromperipheralblood blood
15 chr10:22825000-22852800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr10:22825000-22863800 Weak transcription Hela-S3 cervix
17 chr10:22825200-22840000 Strong transcription Fetal Stomach stomach
18 chr10:22825600-22843800 Weak transcription Stomach Mucosa stomach
19 chr10:22825600-22888000 Weak transcription HMEC breast
20 chr10:22825800-22843600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr10:22826000-22843400 Weak transcription Fetal Brain Female brain
22 chr10:22826200-22843600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr10:22826600-22843400 Weak transcription Colonic Mucosa Colon
24 chr10:22827000-22842200 Weak transcription Right Atrium heart
25 chr10:22828800-22840200 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr10:22828800-22841400 Weak transcription HSMM muscle
27 chr10:22829000-22887400 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr10:22830600-22840400 Weak transcription Fetal Brain Male brain
29 chr10:22830600-22841200 Weak transcription Fetal Lung lung
30 chr10:22830600-22842400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr10:22830600-22853000 Weak transcription HUVEC blood vessel
32 chr10:22830800-22861000 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr10:22831200-22842800 Weak transcription Ovary ovary
34 chr10:22831200-22843200 Weak transcription NHLF lung
35 chr10:22831200-22843600 Weak transcription Esophagus oesophagus
36 chr10:22831200-22856400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr10:22831600-22842800 Weak transcription Rectal Smooth Muscle rectum
38 chr10:22831800-22852600 Weak transcription A549 lung
39 chr10:22832200-22843600 Weak transcription Pancreas Pancrea
40 chr10:22833000-22842000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr10:22833800-22842000 Weak transcription Gastric stomach
42 chr10:22834000-22840800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr10:22834000-22840800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr10:22834000-22841600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr10:22834000-22843400 Weak transcription Psoas Muscle Psoas
46 chr10:22834000-22843600 Weak transcription Right Ventricle heart
47 chr10:22834000-22843800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
48 chr10:22834000-22844200 Strong transcription Primary hematopoietic stem cells blood
49 chr10:22834200-22845400 Strong transcription Primary B cells from peripheral blood blood
50 chr10:22834200-22845400 Strong transcription GM12878-XiMat blood

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Last update: Aug 31, 2015