Variant report

Variant	rs192696675
Chromosome Location	chr1:57320600-57320601
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869295	chr1:56894955-57656562	Weak transcription Strong transcription Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
2	nsv508215	chr1:57319460-57351150	Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:57316600-57323200	Enhancers	Fetal Intestine Small	intestine
2	chr1:57320200-57320600	Enhancers	Stomach Mucosa	stomach
3	chr1:57320200-57321200	Enhancers	Fetal Intestine Large	intestine
4	chr1:57320200-57324000	Active TSS	Liver	Liver
5	chr1:57320400-57320600	Active TSS	Duodenum Mucosa	Duodenum
6	chr1:57320400-57320600	Active TSS	HepG2	liver
7	chr1:57320600-57320800	Flanking Active TSS	Duodenum Mucosa	Duodenum
8	chr1:57320600-57320800	Flanking Active TSS	HepG2	liver
9	chr1:57320600-57321600	Weak transcription	Stomach Mucosa	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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