Variant report

Variant	rs192799920
Chromosome Location	chr12:9940060-9940061
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr12:9899277..9916007-chr12:9939474..9959569,108	K562	blood:
2	chr12:9939384..9941433-chr12:9943747..9946040,4	K562	blood:
3	chr12:9901100..9927208-chr12:9932356..9954328,123	K562	blood:

Variant related genes	Relation type
ENSG00000110848	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3377937	chr12:9938734-9962518	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:9928400-9945400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr12:9930000-9945400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
3	chr12:9930200-9945800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr12:9935200-9941200	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr12:9935400-9940400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
6	chr12:9936000-9941000	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr12:9937200-9940600	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr12:9937600-9941000	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr12:9937800-9941000	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr12:9938600-9940800	Enhancers	Primary T helper cells fromperipheralblood	blood
11	chr12:9938800-9940400	Enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr12:9939000-9945200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr12:9939600-9940400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
14	chr12:9939600-9940400	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
15	chr12:9939600-9940600	Enhancers	Muscle Satellite Cultured Cells	--
16	chr12:9939800-9940400	Enhancers	Primary T cells from cord blood	blood
17	chr12:9939800-9940400	Active TSS	NH-A	brain
18	chr12:9939800-9940600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr12:9939800-9941000	Weak transcription	H1 Cell Line	embryonic stem cell
20	chr12:9939800-9943600	Weak transcription	Primary T helper cells PMA-I stimulated	--
21	chr12:9939800-9943800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
22	chr12:9939800-9945000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr12:9940000-9940400	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
24	chr12:9940000-9940600	Enhancers	Primary T helper naive cells fromperipheralblood	blood

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