Variant report

Variant	rs192879548
Chromosome Location	chr11:121594256-121594257
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898428	chr11:121568262-121671976	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv832287	chr11:121575379-121722735	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv518668	chr11:121593385-121604656	Enhancers Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:73 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121592800-121594400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
2	chr11:121592800-121594400	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
3	chr11:121592800-121594400	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
4	chr11:121592800-121594400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
5	chr11:121592800-121594400	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr11:121592800-121594400	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr11:121592800-121594400	Active TSS	Brain Angular Gyrus	brain
8	chr11:121592800-121594400	Active TSS	Brain Cingulate Gyrus	brain
9	chr11:121592800-121594400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
10	chr11:121592800-121594600	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
11	chr11:121592800-121594600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr11:121592800-121594600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr11:121592800-121594600	Active TSS	Duodenum Smooth Muscle	Duodenum
14	chr11:121592800-121594800	Active TSS	Brain Substantia Nigra	brain
15	chr11:121593000-121594400	Active TSS	H9 Cell Line	embryonic stem cell
16	chr11:121593000-121594400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr11:121593000-121594400	Active TSS	Aorta	Aorta
18	chr11:121593000-121594400	Enhancers	Esophagus	oesophagus
19	chr11:121593000-121594400	Flanking Active TSS	Fetal Muscle Leg	muscle
20	chr11:121593000-121594400	Active TSS	Ovary	ovary
21	chr11:121593000-121594600	Active TSS	Colon Smooth Muscle	Colon
22	chr11:121593000-121594600	Active TSS	Osteobl	bone
23	chr11:121593200-121594400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr11:121593200-121594400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
25	chr11:121593200-121594400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr11:121593200-121594400	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
27	chr11:121593200-121594400	Flanking Active TSS	Fetal Muscle Trunk	muscle
28	chr11:121593200-121594600	Flanking Active TSS	HUVEC	blood vessel
29	chr11:121593400-121594400	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
30	chr11:121593400-121594400	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr11:121593400-121594400	Active TSS	Breast Myoepithelial Primary Cells	Breast
32	chr11:121593400-121594400	Bivalent/Poised TSS	NHEK	skin
33	chr11:121593400-121594400	Active TSS	NHLF	lung
34	chr11:121593400-121594600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
35	chr11:121593600-121594400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
36	chr11:121593600-121594400	Flanking Active TSS	Adipose Nuclei	Adipose
37	chr11:121593600-121594600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
38	chr11:121593600-121594800	Flanking Active TSS	Stomach Smooth Muscle	stomach
39	chr11:121593600-121594800	Enhancers	HepG2	liver
40	chr11:121593800-121594400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
41	chr11:121593800-121594400	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
42	chr11:121593800-121594400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
43	chr11:121593800-121594400	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
44	chr11:121593800-121594400	Flanking Active TSS	Fetal Brain Male	brain
45	chr11:121593800-121594800	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr11:121593800-121594800	Enhancers	Fetal Thymus	thymus
47	chr11:121594000-121594400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
48	chr11:121594000-121594400	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
49	chr11:121594000-121594400	Flanking Active TSS	Fetal Stomach	stomach
50	chr11:121594000-121594400	Bivalent Enhancer	Skeletal Muscle Female	skeletal muscle

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